RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 RNF20Q5VTR2 975 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 Q6ZUG5 572 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 HERC6Q8IVU3 1022 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 SMARCC2Q8TAQ2 1214 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 BRF1Q92994 677 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 LENG9Q96B70 501 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 CCDC136Q96JN2 1154 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 JAKMIP1Q96N16 626 aaKnown RBP13.58□□□□□ -0.24
SRSF4-204ENST00000489898 SLC9A7Q96T83 725 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 SLC4A7Q9Y6M7 1214 aa13.58□□□□□ -0.24
SRSF4-204ENST00000489898 ESYT2A0FGR8 921 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 MBLAC1A4D2B0 266 aaPredicted RBP13.57□□□□□ -0.24
SRSF4-204ENST00000489898 LGR5O75473 907 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 TAP1Q03518 808 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 NEDD9Q14511 834 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 KRT32Q14532 448 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 CNKSR3Q6P9H4 555 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 RUFY4Q6ZNE9 571 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 RPUSD2Q8IZ73 545 aaKnown RBP13.57□□□□□ -0.24
SRSF4-204ENST00000489898 C7orf31Q8N865 590 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 ZBTB10Q96DT7 871 aa13.57□□□□□ -0.24
SRSF4-204ENST00000489898 RC3H2Q9HBD1 1191 aaKnown RBP13.57□□□□□ -0.24
SRSF4-204ENST00000489898 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.56□□□□□ -0.24
SRSF4-204ENST00000489898 FAM86B1E9PN63 330 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 hCG_1984214I3L0E3 225 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 DHX15O43143 795 aaKnown RBP13.56□□□□□ -0.24
SRSF4-204ENST00000489898 CCNE2O96020 404 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 FAM86B2P0C5J1 330 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 ARP10275 920 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 TCF7P36402 384 aaPredicted RBP13.56□□□□□ -0.24
SRSF4-204ENST00000489898 CHMP4BP1P59074 171 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 PLEKHG4Q58EX7 1191 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 TEX2Q8IWB9 1127 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 ZNF713Q8N859 430 aaPredicted RBP13.56□□□□□ -0.24
SRSF4-204ENST00000489898 CUL5Q93034 780 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 IL17RAQ96F46 866 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 MLXIPQ9HAP2 919 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 KCNH7Q9NS40 1196 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
SRSF4-204ENST00000489898 V9GY48 417 aaPredicted RBP13.56□□□□□ -0.24
SRSF4-204ENST00000489898 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 ZBBXA8MT70 800 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 ZBTB42B2RXF5 422 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 M0R2N6 131 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 MEIS1O00470 390 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 EPB41L2O43491 1005 aaKnown RBP13.55□□□□□ -0.24
SRSF4-204ENST00000489898 SCG2P13521 617 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 POU3F3P20264 500 aaPredicted RBP13.55□□□□□ -0.24
SRSF4-204ENST00000489898 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
SRSF4-204ENST00000489898 NAPAP54920 295 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 MTMR1Q13613 665 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 FAM26DQ5JW98 314 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 KRT40Q6A162 431 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.55□□□□□ -0.242e-7■■■■□ 23.8
SRSF4-204ENST00000489898 PHOSPHO2Q8TCD6 241 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 SP7Q8TDD2 431 aaPredicted RBP13.55□□□□□ -0.24
SRSF4-204ENST00000489898 LINC01599Q8WXQ3 324 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 PHKBQ93100 1093 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 MXRA8Q9BRK3 442 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 USP26Q9BXU7 913 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 ZMYND12Q9H0C1 365 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 NCOA5Q9HCD5 579 aaKnown RBP13.55□□□□□ -0.24
SRSF4-204ENST00000489898 ZSWIM6Q9HCJ5 1215 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 NFASCO94856 1347 aa13.55□□□□□ -0.24
SRSF4-204ENST00000489898 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 C17orf102A2RUQ5 167 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 RFXAPO00287 272 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 PPFIA3O75145 1194 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 ATG7O95352 703 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 GJB5O95377 273 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
SRSF4-204ENST00000489898 PDIA3P30101 505 aaKnown RBP13.54□□□□□ -0.24
SRSF4-204ENST00000489898 ADCY7P51828 1080 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 HTRA4P83105 476 aaPredicted RBP13.54□□□□□ -0.24
SRSF4-204ENST00000489898 SP4Q02446 784 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 AP3B2Q13367 1082 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 RPAINQ86UA6 219 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 CRIPAKQ8N1N5 446 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 CCDC155Q8N6L0 562 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 DBF4BQ8NFT6 615 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 RASGRP4Q8TDF6 673 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 MTIF3Q9H2K0 278 aaKnown RBP13.54□□□□□ -0.24
SRSF4-204ENST00000489898 EHMT1Q9H9B1 1298 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 AGO4Q9HCK5 861 aaKnown RBP13.54□□□□□ -0.24
SRSF4-204ENST00000489898 PKD2L1Q9P0L9 805 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 NOD1Q9Y239 953 aa13.54□□□□□ -0.24
SRSF4-204ENST00000489898 CAND2O75155 1236 aa13.53□□□□□ -0.24
SRSF4-204ENST00000489898 CHRNA1P02708 482 aa13.53□□□□□ -0.24
SRSF4-204ENST00000489898 CYP3A4P08684 503 aa13.53□□□□□ -0.24
SRSF4-204ENST00000489898 IFNAR1P17181 557 aa13.53□□□□□ -0.24
SRSF4-204ENST00000489898 ATP4AP20648 1035 aa13.53□□□□□ -0.24
SRSF4-204ENST00000489898 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
SRSF4-204ENST00000489898 CEP55Q53EZ4 464 aa13.53□□□□□ -0.24
SRSF4-204ENST00000489898 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
SRSF4-204ENST00000489898 JPH1Q9HDC5 661 aaPredicted RBP13.53□□□□□ -0.24
SRSF4-204ENST00000489898 LINC01553A4QN01 128 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms