RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 ADCY6O43306 1168 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 CCNE2O96020 404 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 CST5P28325 142 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-224ENST00000475524 CNGA1P29973 690 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 CCND3P30281 292 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-224ENST00000475524 CPT1AP50416 773 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 ACTR2P61160 394 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 SH3TC2Q8TF17 1288 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 ZNF333Q96JL9 665 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 SPATA33Q96N06 139 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 CCSER1Q9C0I3 900 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.05■□□□□ 0.32
MCF2L-224ENST00000475524 AP5M1Q9H0R1 490 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 PKD2L1Q9P0L9 805 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 LRWD1Q9UFC0 647 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 PCDHA7Q9UN72 937 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 PCDHA10Q9Y5I2 948 aa17.05■□□□□ 0.32
MCF2L-224ENST00000475524 MYH9P35579 1960 aaKnown RBP17.05■□□□□ 0.32
MCF2L-224ENST00000475524 KDM3AQ9Y4C1 1321 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 IGKV6D-21A0A0A0MT36 114 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 NOP56O00567 594 aaKnown RBP17.04■□□□□ 0.32
MCF2L-224ENST00000475524 KPNA6O60684 536 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.32
MCF2L-224ENST00000475524 PPFIA4O75335 1185 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 PSAPP07602 524 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 MIS18BP1Q6P0N0 1132 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 ABHD15Q6UXT9 468 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 CHAMP1Q96JM3 812 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 GPR20Q99678 358 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 POLR3CQ9BUI4 534 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-224ENST00000475524 TUFT1Q9NNX1 390 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 DISC1Q9NRI5 854 aa17.04■□□□□ 0.32
MCF2L-224ENST00000475524 SYNRGQ9UMZ2 1314 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 POTEMA6NI47 508 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 LGR5O75473 907 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 SUPT20HL2P0C7V6 817 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 CMA1P23946 247 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 RPA1P27694 616 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 TXLNAP40222 546 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 SLC26A2P50443 739 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 HSDL1Q3SXM5 330 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 HYIQ5T013 277 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 NCAPH2Q6IBW4 605 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 AFAP1L1Q8TED9 768 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 COPS5Q92905 334 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 GJA10Q969M2 543 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 PYM1Q9BRP8 204 aaKnown RBP17.03■□□□□ 0.32
MCF2L-224ENST00000475524 CSRNP2Q9H175 543 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
MCF2L-224ENST00000475524 FAM237AA0A1B0GTK4 181 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 GSTTP1A0A1W2PQM5 241 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 DDX39AO00148 427 aaKnown RBP17.02■□□□□ 0.32
MCF2L-224ENST00000475524 EML1O00423 815 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 DYNC1LI2O43237 492 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-224ENST00000475524 ZEB2O60315 1214 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 LYPLA2O95372 231 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 P4HBP07237 508 aaKnown RBP17.02■□□□□ 0.32
MCF2L-224ENST00000475524 MMP3P08254 477 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 CCL5P13501 91 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 UBA7P41226 1012 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 DGKDQ16760 1214 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 TMEM63BQ5T3F8 832 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 GJC2Q5T442 439 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-224ENST00000475524 FAM160B1Q5W0V3 765 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 RESP18Q5W5W9 173 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 LHX8Q68G74 356 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 ATP6V0A1Q93050 837 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 HSD17B14Q9BPX1 270 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 NT5C3AQ9H0P0 336 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.32
MCF2L-224ENST00000475524 IGSF9BQ9UPX0 1349 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 POTEFA5A3E0 1075 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 GOLGA6L4A6NEF3 574 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 PTMSP20962 102 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 TCF7P36402 384 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-224ENST00000475524 UBE2HP62256 183 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 GRIN1Q05586 938 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 FSCN1Q16658 493 aaKnown RBP17.01■□□□□ 0.31
MCF2L-224ENST00000475524 PLPPR4Q7Z2D5 763 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
MCF2L-224ENST00000475524 KLHDC9Q8NEP7 349 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 CLIC6Q96NY7 704 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 EIF2AK1Q9BQI3 630 aaKnown RBP17.01■□□□□ 0.31
MCF2L-224ENST00000475524 TSEN34Q9BSV6 310 aaKnown RBP17.01■□□□□ 0.31
MCF2L-224ENST00000475524 UNC93B1Q9H1C4 597 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 BCAS3Q9H6U6 928 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 FAM13BQ9NYF5 915 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 CCDC39Q9UFE4 941 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 SAMM50Q9Y512 469 aa17.01■□□□□ 0.31
MCF2L-224ENST00000475524 CTAGE5O15320 804 aa17■□□□□ 0.31
MCF2L-224ENST00000475524 CHMP2AO43633 222 aa17■□□□□ 0.31
MCF2L-224ENST00000475524 GJB1P08034 283 aa17■□□□□ 0.31
MCF2L-224ENST00000475524 QARSP47897 775 aaKnown RBP17■□□□□ 0.31
MCF2L-224ENST00000475524 PSMC5P62195 406 aa17■□□□□ 0.31
MCF2L-224ENST00000475524 SHC4Q6S5L8 630 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms