RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 ZFP91Q96JP5 570 aaPredicted RBP17.56■□□□□ 0.4
FDPS-208ENST00000470171 TPCN1Q9ULQ1 816 aa17.56■□□□□ 0.4
FDPS-208ENST00000470171 IPO5O00410 1097 aaKnown RBP17.55■□□□□ 0.4
FDPS-208ENST00000470171 SOX1O00570 391 aaPredicted RBP17.55■□□□□ 0.4
FDPS-208ENST00000470171 ATG7O95352 703 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 SMIM10L2AP0DMW4 78 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 SMIM10L2BP0DMW5 78 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 STK3Q13188 491 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 RAB30Q15771 203 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 ZNF697Q5TEC3 545 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 KRT25Q7Z3Z0 450 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 RSPH3Q86UC2 560 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 BLIDQ8IZY5 108 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 ZSCAN31Q96LW9 406 aaPredicted RBP17.55■□□□□ 0.4
FDPS-208ENST00000470171 BRMS1Q9HCU9 246 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 TMEM260Q9NX78 707 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
FDPS-208ENST00000470171 GSTTP1A0A1W2PQM5 241 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 CKBP12277 381 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 KRT76Q01546 638 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 FAM160B1Q5W0V3 765 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 ZNF746Q6NUN9 644 aaPredicted RBP17.54■□□□□ 0.4
FDPS-208ENST00000470171 LRRC8DQ7L1W4 858 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 LRCH3Q96II8 777 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 RIT2Q99578 217 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 ZNF577Q9BSK1 485 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 RNPEPQ9H4A4 650 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 LIMCH1Q9UPQ0 1083 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 SLC4A7Q9Y6M7 1214 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 MYH6P13533 1939 aa17.54■□□□□ 0.4
FDPS-208ENST00000470171 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 IGLV3-22A0A075B6J6 115 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 CYP3A7-CYP3A51PA0A087WV96 503 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 FAM86B1E9PN63 330 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 CXCL10P02778 98 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 FAM86B2P0C5J1 330 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 CYP3A7P24462 503 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 RBM25P49756 843 aaKnown RBP17.53■□□□□ 0.4
FDPS-208ENST00000470171 STAT5BP51692 787 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 ACTR2P61160 394 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 UTP14CQ5TAP6 766 aaKnown RBP17.53■□□□□ 0.4
FDPS-208ENST00000470171 MIS18BP1Q6P0N0 1132 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 ZNF710Q8N1W2 664 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 DEFB123Q8N688 67 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
FDPS-208ENST00000470171 SH2B1Q9NRF2 756 aaPredicted RBP17.53■□□□□ 0.4
FDPS-208ENST00000470171 MSRAQ9UJ68 235 aa17.53■□□□□ 0.4
FDPS-208ENST00000470171 BAZ2BQ9UIF8 2168 aaKnown RBP17.53■□□□□ 0.4
FDPS-208ENST00000470171 UMODL1Q5DID0 1318 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 IGKV6D-21A0A0A0MT36 114 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 ABHD14A-ACY1A0A1B0GW23 586 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 ARP10275 920 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 GCFC2P16383 781 aaKnown RBP17.52■□□□□ 0.4
FDPS-208ENST00000470171 ADAM17P78536 824 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 NONOQ15233 471 aaKnown RBP eCLIP17.52■□□□□ 0.4
FDPS-208ENST00000470171 C8orf34Q49A92 452 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 Q4G0T1 1027 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 RDM1Q8NG50 284 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 CYP2W1Q8TAV3 490 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 PGBD1Q96JS3 809 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 CTAGE1Q96RT6 745 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 SLC9A7Q96T83 725 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 PHF20Q9BVI0 1012 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 FTOQ9C0B1 505 aaKnown RBP eCLIP17.52■□□□□ 0.4
FDPS-208ENST00000470171 BCAS3Q9H6U6 928 aa17.52■□□□□ 0.4
FDPS-208ENST00000470171 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
FDPS-208ENST00000470171 RSPH10B2B2RC85 870 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 KIF28PB7ZC32 967 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 M0R2N6 131 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 SORBS3O60504 671 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 RSPH10BP0C881 870 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 ACRP10323 421 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 SFNP31947 248 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 SP4Q02446 784 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 PPFIA1Q13136 1202 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 ITGB3BPQ13352 177 aaPredicted RBP17.51■□□□□ 0.39
FDPS-208ENST00000470171 TRIM29Q14134 588 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 TRIM71Q2Q1W2 868 aaKnown RBP17.51■□□□□ 0.39
FDPS-208ENST00000470171 PRR16Q569H4 304 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 CNKSR3Q6P9H4 555 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 NME8Q8N427 588 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 SCLYQ96I15 445 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 PCDHA10Q9Y5I2 948 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 LTBP2Q14767 1821 aa17.51■□□□□ 0.39
FDPS-208ENST00000470171 CCDC194A0A1B0GVG4 234 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 MBLAC1A4D2B0 266 aaPredicted RBP17.5■□□□□ 0.39
FDPS-208ENST00000470171 DHX15O43143 795 aaKnown RBP17.5■□□□□ 0.39
FDPS-208ENST00000470171 HBP1O60381 514 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 SEC24BO95487 1268 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 PSAPP07602 524 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 THPOP40225 353 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 IKBKEQ14164 716 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 ME3Q16798 604 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 ABHD15Q6UXT9 468 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 OTOP2Q7RTS6 562 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 TBCKQ8TEA7 893 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 DHX38Q92620 1227 aaKnown RBP17.5■□□□□ 0.39
FDPS-208ENST00000470171 APBB2Q92870 758 aa17.5■□□□□ 0.39
FDPS-208ENST00000470171 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms