RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SOCS4Q8WXH5 440 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 GJA10Q969M2 543 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 DHX58Q96C10 678 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 GZF1Q9H116 711 aaPredicted RBP14.3□□□□□ -0.12
TRAF4-208ENST00000469529 UNC45AQ9H3U1 944 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 VTA1Q9NP79 307 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 BLOC1S4Q9NUP1 217 aa14.3□□□□□ -0.12
TRAF4-208ENST00000469529 GTPBP6O43824 516 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-208ENST00000469529 PLCG1P19174 1290 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 CCT6AP40227 531 aaKnown RBP14.29□□□□□ -0.12
TRAF4-208ENST00000469529 STAT6P42226 847 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 POSTNQ15063 836 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 OLFML2BQ68BL8 750 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 TRIML1Q8N9V2 468 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 MAML3Q96JK9 1138 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 GSDMAQ96QA5 445 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 MTRQ99707 1265 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 EIF2AK1Q9BQI3 630 aaKnown RBP14.29□□□□□ -0.12
TRAF4-208ENST00000469529 TINF2Q9BSI4 451 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 GTPBP4Q9BZE4 634 aaKnown RBP14.29□□□□□ -0.12
TRAF4-208ENST00000469529 KATNBL1Q9H079 304 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 DDX41Q9UJV9 622 aaKnown RBP14.29□□□□□ -0.12
TRAF4-208ENST00000469529 PCDHA10Q9Y5I2 948 aa14.29□□□□□ -0.12
TRAF4-208ENST00000469529 SYCE3A1L190 88 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 WDR64B1ANS9 1081 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 MED24O75448 989 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 SMC2O95347 1197 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 SNAI1O95863 264 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-208ENST00000469529 CCDC192P0DO97 292 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 RGS2P41220 211 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 DPYDQ12882 1025 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 CT47A1Q5JQC4 288 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-208ENST00000469529 TAPT1Q6NXT6 567 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 SV2BQ7L1I2 683 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 ARMCX2Q7L311 632 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 MIER3Q7Z3K6 550 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 SCFD2Q8WU76 684 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 RAD54LQ92698 747 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 CDK5RAP3Q96JB5 506 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-208ENST00000469529 NACC1Q96RE7 527 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 ABHD16BQ9H3Z7 469 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 NRBP1Q9UHY1 535 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 DNM3Q9UQ16 869 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 PCDHA5Q9Y5H7 936 aa14.28□□□□□ -0.12
TRAF4-208ENST00000469529 IGKV6D-21A0A0A0MT36 114 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 DKC1O60832 514 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAF4-208ENST00000469529 CCNE2O96020 404 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 GNRH1P01148 92 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 FCGRTP55899 365 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 LACTBP83111 547 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-208ENST00000469529 SP2Q02086 613 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 TTLL4Q14679 1199 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 GSE1Q14687 1217 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 ECM1Q16610 540 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 NCAPH2Q6IBW4 605 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 SASS6Q6UVJ0 657 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 METTL7BQ6UX53 244 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 ABHD15Q6UXT9 468 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 C4orf19Q8IY42 314 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 SYT2Q8N9I0 419 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-208ENST00000469529 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.13
TRAF4-208ENST00000469529 EMID1Q96A84 441 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-208ENST00000469529 ERO1AQ96HE7 468 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 ZSWIM4Q9H7M6 989 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 JPH1Q9HDC5 661 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-208ENST00000469529 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-208ENST00000469529 KIAA1024Q9UPX6 916 aa14.27□□□□□ -0.13
TRAF4-208ENST00000469529 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.13
TRAF4-208ENST00000469529 PVALEFA0A1B0GWK0 134 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 TNPO2O14787 897 aaKnown RBP14.26□□□□□ -0.13
TRAF4-208ENST00000469529 EYA4O95677 639 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
TRAF4-208ENST00000469529 SP3Q02447 781 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 KCNB1Q14721 858 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 IQSEC1Q6DN90 963 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 FBXO46Q6PJ61 603 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-208ENST00000469529 SEPT14Q6ZU15 432 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 CKAP2LQ8IYA6 745 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 TRMT44Q8IYL2 757 aaKnown RBP14.26□□□□□ -0.13
TRAF4-208ENST00000469529 RASSF8Q8NHQ8 419 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 NPLOC4Q8TAT6 608 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 CD99L2Q8TCZ2 262 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 LRRC15Q8TF66 581 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 KCND2Q9NZV8 630 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 TCEAL9Q9UHQ7 104 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 TRIM17Q9Y577 477 aa14.26□□□□□ -0.13
TRAF4-208ENST00000469529 ZNF236Q9UL36 1845 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 FSD2A1L4K1 749 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 NKRFO15226 690 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRAF4-208ENST00000469529 FARP2O94887 1054 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-208ENST00000469529 PSAPP07602 524 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 ACTR2P61160 394 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 PSMC5P62195 406 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 PNOCQ13519 176 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 CELF3Q5SZQ8 465 aaKnown RBP14.25□□□□□ -0.13
TRAF4-208ENST00000469529 KCNK18Q7Z418 384 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms