RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 TBCKQ8TEA7 893 aa20.09■□□□□ 0.81
CCDC188-201ENST00000439765 KAT2BQ92831 832 aa20.09■□□□□ 0.81
CCDC188-201ENST00000439765 GPR20Q99678 358 aa20.09■□□□□ 0.81
CCDC188-201ENST00000439765 LLPHQ9BRT6 129 aaKnown RBP20.09■□□□□ 0.81
CCDC188-201ENST00000439765 HIPK3Q9H422 1215 aa20.09■□□□□ 0.81
CCDC188-201ENST00000439765 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.09■□□□□ 0.81
CCDC188-201ENST00000439765 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.08■□□□□ 0.81
CCDC188-201ENST00000439765 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.08■□□□□ 0.81
CCDC188-201ENST00000439765 MEIS1O00470 390 aa20.08■□□□□ 0.81
CCDC188-201ENST00000439765 F2P00734 622 aa20.08■□□□□ 0.81
CCDC188-201ENST00000439765 CYP2C18P33260 490 aa20.08■□□□□ 0.81
CCDC188-201ENST00000439765 PSRC1Q6PGN9 363 aaPredicted RBP20.08■□□□□ 0.81
CCDC188-201ENST00000439765 TRIM50Q86XT4 487 aa20.08■□□□□ 0.81
CCDC188-201ENST00000439765 FAM161BQ96MY7 647 aa20.08■□□□□ 0.81
CCDC188-201ENST00000439765 NOC4LQ9BVI4 516 aaKnown RBP20.08■□□□□ 0.81
CCDC188-201ENST00000439765 TRPV6Q9H1D0 765 aa20.08■□□□□ 0.81
CCDC188-201ENST00000439765 AGO4Q9HCK5 861 aaKnown RBP20.08■□□□□ 0.81
CCDC188-201ENST00000439765 JPH1Q9HDC5 661 aaPredicted RBP20.08■□□□□ 0.81
CCDC188-201ENST00000439765 DAXXQ9UER7 740 aaPredicted RBP20.08■□□□□ 0.81
CCDC188-201ENST00000439765 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 DDX39AO00148 427 aaKnown RBP20.07■□□□□ 0.8
CCDC188-201ENST00000439765 MAFGO15525 162 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 PPFIA4O75335 1185 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 LGALS2P05162 132 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 HSP90AA1P07900 732 aaKnown RBP20.07■□□□□ 0.8
CCDC188-201ENST00000439765 SETQ01105 290 aaPredicted RBP20.07■□□□□ 0.8
CCDC188-201ENST00000439765 ITGB3BPQ13352 177 aaPredicted RBP20.07■□□□□ 0.8
CCDC188-201ENST00000439765 TRIM29Q14134 588 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCDC188-201ENST00000439765 PRR16Q569H4 304 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 NIPA1Q7RTP0 329 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 KRT25Q7Z3Z0 450 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 SDF4Q9BRK5 362 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 KATNAL1Q9BW62 490 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 TTYH1Q9H313 450 aaPredicted RBP20.07■□□□□ 0.8
CCDC188-201ENST00000439765 SEMA6BQ9H3T3 888 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 TRMT13Q9NUP7 481 aaKnown RBP20.07■□□□□ 0.8
CCDC188-201ENST00000439765 KAT6AQ92794 2004 aa20.07■□□□□ 0.8
CCDC188-201ENST00000439765 A0A0C4DFX4 3053 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 KRT2P35908 639 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 PSEN2P49810 448 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 NR5A1Q13285 461 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 MFSD10Q14728 455 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 INF2Q27J81 1249 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 KIAA0753Q2KHM9 967 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 SPRYD3Q8NCJ5 442 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 C16orf70Q9BSU1 422 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 BRMS1Q9HCU9 246 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 IL23AQ9NPF7 189 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 UMODL1Q5DID0 1318 aa20.06■□□□□ 0.8
CCDC188-201ENST00000439765 MYH9P35579 1960 aaKnown RBP20.06■□□□□ 0.8
CCDC188-201ENST00000439765 EDIL3O43854 480 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 TDP2O95551 362 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 MMP1P03956 469 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 TCF7P36402 384 aaPredicted RBP20.05■□□□□ 0.8
CCDC188-201ENST00000439765 HMGN5P82970 282 aaKnown RBP20.05■□□□□ 0.8
CCDC188-201ENST00000439765 UTP14CQ5TAP6 766 aaKnown RBP20.05■□□□□ 0.8
CCDC188-201ENST00000439765 KRT40Q6A162 431 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 NFRKBQ6P4R8 1299 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 PIK3AP1Q6ZUJ8 805 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 ZNF365Q70YC5 407 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 LENG9Q96B70 501 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 CDX2Q99626 313 aaPredicted RBP20.05■□□□□ 0.8
CCDC188-201ENST00000439765 ZNF577Q9BSK1 485 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 WNT8AQ9H1J5 351 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 FOXD4L1Q9NU39 408 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 SLC9A2Q9UBY0 812 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 NFASCO94856 1347 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 FAM205CA6NFA0 338 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 IPO5O00410 1097 aaKnown RBP20.05■□□□□ 0.8
CCDC188-201ENST00000439765 SUPT20HL2P0C7V6 817 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 CIITAP33076 1130 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 EARS2Q5JPH6 523 aaKnown RBP20.05■□□□□ 0.8
CCDC188-201ENST00000439765 FAM184AQ8NB25 1140 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 C8orf76Q96K31 380 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 SMC3Q9UQE7 1217 aa20.05■□□□□ 0.8
CCDC188-201ENST00000439765 H3BRB1 525 aa20.04■□□□□ 0.8
CCDC188-201ENST00000439765 ACRP10323 421 aa20.04■□□□□ 0.8
CCDC188-201ENST00000439765 DNAJB2P25686 324 aa20.04■□□□□ 0.8
CCDC188-201ENST00000439765 USP11P51784 963 aa20.04■□□□□ 0.8
CCDC188-201ENST00000439765 DIS3L2Q8IYB7 885 aaKnown RBP20.04■□□□□ 0.8
CCDC188-201ENST00000439765 C7orf31Q8N865 590 aa20.04■□□□□ 0.8
CCDC188-201ENST00000439765 HERVK_113Q902F9 699 aa20.04■□□□□ 0.8
CCDC188-201ENST00000439765 TUT1Q9H6E5 874 aaKnown RBP20.04■□□□□ 0.8
CCDC188-201ENST00000439765 HDAC6Q9UBN7 1215 aa20.04■□□□□ 0.8
CCDC188-201ENST00000439765 ZNF215Q9UL58 517 aaPredicted RBP20.04■□□□□ 0.8
CCDC188-201ENST00000439765 UNC80Q8N2C7 3258 aa20.03■□□□□ 0.8
CCDC188-201ENST00000439765 GSTTP1A0A1W2PQM5 241 aa20.03■□□□□ 0.8
CCDC188-201ENST00000439765 HAS3O00219 553 aa20.03■□□□□ 0.8
CCDC188-201ENST00000439765 PTPN11Q06124 597 aaPredicted RBP20.03■□□□□ 0.8
CCDC188-201ENST00000439765 LETM2Q2VYF4 491 aa20.03■□□□□ 0.8
CCDC188-201ENST00000439765 GDF6Q6KF10 455 aaPredicted RBP20.03■□□□□ 0.8
CCDC188-201ENST00000439765 BTBD18B2RXH4 712 aa20.02■□□□□ 0.8
CCDC188-201ENST00000439765 CCNE2O96020 404 aa20.02■□□□□ 0.8
CCDC188-201ENST00000439765 CYP2C9P11712 490 aa20.02■□□□□ 0.8
CCDC188-201ENST00000439765 GJB2P29033 226 aa20.02■□□□□ 0.8
CCDC188-201ENST00000439765 CCL23P55773 120 aa20.02■□□□□ 0.8
CCDC188-201ENST00000439765 ACTR2P61160 394 aa20.02■□□□□ 0.8
CCDC188-201ENST00000439765 NEK8Q86SG6 692 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms