RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ARHGEF15O94989 841 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 CA3P07451 260 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 WDR5P61964 334 aaKnown RBP21.13■□□□□ 0.97
NUP50-207ENST00000424634 PKN1Q16512 942 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 PFKFB3Q16875 520 aaPredicted RBP21.13■□□□□ 0.97
NUP50-207ENST00000424634 PPP2R2DQ66LE6 453 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 TMCO2Q7Z6W1 182 aaPredicted RBP21.13■□□□□ 0.97
NUP50-207ENST00000424634 ZNF713Q8N859 430 aaPredicted RBP21.13■□□□□ 0.97
NUP50-207ENST00000424634 SEPT1Q8WYJ6 367 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 GAS2L1Q99501 681 aaPredicted RBP21.13■□□□□ 0.97
NUP50-207ENST00000424634 ANO3Q9BYT9 981 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 OSBPL7Q9BZF2 842 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 KCNH7Q9NS40 1196 aa21.13■□□□□ 0.97
NUP50-207ENST00000424634 NID2Q14112 1375 aa21.12■□□□□ 0.97
NUP50-207ENST00000424634 RSPH10B2B2RC85 870 aa21.12■□□□□ 0.97
NUP50-207ENST00000424634 FOSP01100 380 aaPredicted RBP21.12■□□□□ 0.97
NUP50-207ENST00000424634 RSPH10BP0C881 870 aa21.12■□□□□ 0.97
NUP50-207ENST00000424634 ARP10275 920 aa21.12■□□□□ 0.97
NUP50-207ENST00000424634 DEFB103AP81534 67 aa21.12■□□□□ 0.97
NUP50-207ENST00000424634 TEX2Q8IWB9 1127 aa21.12■□□□□ 0.97
NUP50-207ENST00000424634 EHMT1Q9H9B1 1298 aa21.12■□□□□ 0.97
NUP50-207ENST00000424634 ZNF215Q9UL58 517 aaPredicted RBP21.12■□□□□ 0.97
NUP50-207ENST00000424634 CCDC196A0A1B0GTZ2 297 aa21.11■□□□□ 0.97
NUP50-207ENST00000424634 NEFLP07196 543 aa21.11■□□□□ 0.97
NUP50-207ENST00000424634 SCG2P13521 617 aa21.11■□□□□ 0.97
NUP50-207ENST00000424634 PSMA5P28066 241 aa21.11■□□□□ 0.97
NUP50-207ENST00000424634 NTRK3Q16288 839 aa21.11■□□□□ 0.97
NUP50-207ENST00000424634 LMBR1Q8WVP7 490 aa21.11■□□□□ 0.97
NUP50-207ENST00000424634 ABHD14A-ACY1A0A1B0GW23 586 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 PRPF3O43395 683 aaKnown RBP21.1■□□□□ 0.97
NUP50-207ENST00000424634 PPFIA3O75145 1194 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 LGR5O75473 907 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 GNAT1P11488 350 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 SREBF1P36956 1147 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 KCNJ6P48051 423 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 EVCP57679 992 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 ARHGAP4P98171 946 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 CEP55Q53EZ4 464 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 JAKMIP3Q5VZ66 844 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 DBF4BQ8NFT6 615 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 PHKBQ93100 1093 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 PCYT2Q99447 389 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 CERS4Q9HA82 394 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 ZSWIM6Q9HCJ5 1215 aa21.1■□□□□ 0.97
NUP50-207ENST00000424634 SPTBN5Q9NRC6 3674 aaKnown RBP21.1■□□□□ 0.97
NUP50-207ENST00000424634 RFXAPO00287 272 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 MEIS1O00470 390 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 EPB41L2O43491 1005 aaKnown RBP21.09■□□□□ 0.97
NUP50-207ENST00000424634 IGFBP4P22692 258 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 MARK3P27448 753 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 PDIA3P30101 505 aaKnown RBP21.09■□□□□ 0.97
NUP50-207ENST00000424634 TAP1Q03518 808 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 ITGB3BPQ13352 177 aaPredicted RBP21.09■□□□□ 0.97
NUP50-207ENST00000424634 AP3B2Q13367 1082 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 MKRN4PQ13434 485 aaPredicted RBP21.09■□□□□ 0.97
NUP50-207ENST00000424634 IKBKEQ14164 716 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 RUFY3Q7L099 469 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 SPRED2Q7Z698 418 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 PPM1EQ8WY54 764 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 GLT8D2Q9H1C3 349 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 PRDM6Q9NQX0 595 aa21.09■□□□□ 0.97
NUP50-207ENST00000424634 EMSYQ7Z589 1322 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 NRCAMQ92823 1304 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 LCHNA4D1U4 455 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 EPOPA6NHQ4 379 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 KIF28PB7ZC32 967 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 CTSHP09668 335 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 TOB2Q14106 344 aaPredicted RBP21.08■□□□□ 0.97
NUP50-207ENST00000424634 PLEKHG4Q58EX7 1191 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.08■□□□□ 0.97
NUP50-207ENST00000424634 RUFY4Q6ZNE9 571 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 MICAL3Q7RTP6 2002 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 CRYGNQ8WXF5 182 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 COL25A1Q9BXS0 654 aaPredicted RBP21.08■□□□□ 0.97
NUP50-207ENST00000424634 ZMYND12Q9H0C1 365 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 SMARCAD1Q9H4L7 1026 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 NCOA5Q9HCD5 579 aaKnown RBP21.08■□□□□ 0.97
NUP50-207ENST00000424634 AGO4Q9HCK5 861 aaKnown RBP21.08■□□□□ 0.97
NUP50-207ENST00000424634 JPH1Q9HDC5 661 aaPredicted RBP21.08■□□□□ 0.97
NUP50-207ENST00000424634 ERAP1Q9NZ08 941 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 SLC9A2Q9UBY0 812 aa21.08■□□□□ 0.97
NUP50-207ENST00000424634 NFASCO94856 1347 aa21.07■□□□□ 0.96
NUP50-207ENST00000424634 ESYT2A0FGR8 921 aa21.07■□□□□ 0.96
NUP50-207ENST00000424634 FAM86B1E9PN63 330 aa21.07■□□□□ 0.96
NUP50-207ENST00000424634 TLL1O43897 1013 aa21.07■□□□□ 0.96
NUP50-207ENST00000424634 FAM86B2P0C5J1 330 aa21.07■□□□□ 0.96
NUP50-207ENST00000424634 CCT2P78371 535 aaKnown RBP21.07■□□□□ 0.96
NUP50-207ENST00000424634 FAM26DQ5JW98 314 aa21.07■□□□□ 0.96
NUP50-207ENST00000424634 MARCH8Q5T0T0 291 aa21.07■□□□□ 0.96
NUP50-207ENST00000424634 GLG1Q92896 1179 aa21.07■□□□□ 0.96
NUP50-207ENST00000424634 CAND2O75155 1236 aa21.06■□□□□ 0.96
NUP50-207ENST00000424634 IFNAR1P17181 557 aa21.06■□□□□ 0.96
NUP50-207ENST00000424634 ACTR2P61160 394 aa21.06■□□□□ 0.96
NUP50-207ENST00000424634 PPFIA1Q13136 1202 aa21.06■□□□□ 0.96
NUP50-207ENST00000424634 CCDC85BQ15834 202 aaPredicted RBP21.06■□□□□ 0.96
NUP50-207ENST00000424634 GRIK4Q16099 956 aa21.06■□□□□ 0.96
NUP50-207ENST00000424634 LARP6Q9BRS8 491 aaKnown RBP21.06■□□□□ 0.96
NUP50-207ENST00000424634 PPP4R2Q9NY27 417 aa21.06■□□□□ 0.96
NUP50-207ENST00000424634 PRRC2BQ5JSZ5 2229 aaKnown RBP21.06■□□□□ 0.96
NUP50-207ENST00000424634 EFCAB14O75071 495 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms