RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 U2AF1L4Q8WU68 220 aaKnown RBP11.23□□□□□ -0.61
HDLBP-209ENST00000422933 GLG1Q92896 1179 aa11.23□□□□□ -0.61
HDLBP-209ENST00000422933 LENG9Q96B70 501 aa11.23□□□□□ -0.61
HDLBP-209ENST00000422933 SPATA32Q96LK8 384 aa11.23□□□□□ -0.61
HDLBP-209ENST00000422933 TSEN34Q9BSV6 310 aaKnown RBP11.23□□□□□ -0.61
HDLBP-209ENST00000422933 KATNAL1Q9BW62 490 aa11.23□□□□□ -0.61
HDLBP-209ENST00000422933 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
HDLBP-209ENST00000422933 TFIP11Q9UBB9 837 aaKnown RBP11.23□□□□□ -0.61
HDLBP-209ENST00000422933 PCDHA10Q9Y5I2 948 aa11.23□□□□□ -0.61
HDLBP-209ENST00000422933 ELP1O95163 1332 aa11.23□□□□□ -0.61
HDLBP-209ENST00000422933 MOXD2PA6NHM9 499 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 A6NJR5 290 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 GOLGA6L22H0YM25 854 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 SPTLC2O15270 562 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 SORBS3O60504 671 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 ATP9AO75110 1047 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 PSMD10O75832 226 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 PGK1P00558 417 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 MYL3P08590 195 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 DDIT3P35638 169 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 LONP1P36776 959 aaKnown RBP11.22□□□□□ -0.61
HDLBP-209ENST00000422933 TECP42680 631 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 SLC26A2P50443 739 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 ACTR2P61160 394 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 SP2Q02086 613 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 DNM1Q05193 864 aaKnown RBP11.22□□□□□ -0.61
HDLBP-209ENST00000422933 ARHGAP1Q07960 439 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 SEMA3FQ13275 785 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 PPP2R5CQ13362 524 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 NBR1Q14596 966 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 SLC39A14Q15043 492 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 KRT79Q5XKE5 535 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 FAM173BQ6P4H8 233 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 CKAP2LQ8IYA6 745 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
HDLBP-209ENST00000422933 RASSF8Q8NHQ8 419 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 NEK9Q8TD19 979 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 AFG1LQ8WV93 481 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 KAT6AQ92794 2004 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 COPS5Q92905 334 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 ATP6V0A1Q93050 837 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 AK8Q96MA6 479 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 GLT1D1Q96MS3 346 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 CCDC43Q96MW1 224 aaKnown RBP11.22□□□□□ -0.61
HDLBP-209ENST00000422933 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 MTMR9Q96QG7 549 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 UIMC1Q96RL1 719 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 USP28Q96RU2 1077 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 TRIOBPQ9H2D6 2365 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 SMARCAD1Q9H4L7 1026 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 DOCK5Q9H7D0 1870 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 DISC1Q9NRI5 854 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 LRWD1Q9UFC0 647 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 SYNRGQ9UMZ2 1314 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 CLIC4Q9Y696 253 aa11.22□□□□□ -0.61
HDLBP-209ENST00000422933 TCHHQ07283 1943 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 VWA3AA6NCI4 1184 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 DNM1LO00429 736 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 PPP6R2O75170 966 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 MMP3P08254 477 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 CST5P28325 142 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-209ENST00000422933 TCF7P36402 384 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-209ENST00000422933 UBA7P41226 1012 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 ME1P48163 572 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 GJA8P48165 433 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 NASPP49321 788 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-209ENST00000422933 FXR1P51114 621 aaKnown RBP eCLIP11.21□□□□□ -0.61
HDLBP-209ENST00000422933 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.616e-10■■□□□ 12.6
HDLBP-209ENST00000422933 ITGB3BPQ13352 177 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-209ENST00000422933 EPHA7Q15375 998 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 KCNA10Q16322 511 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 GJC2Q5T442 439 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-209ENST00000422933 UTP14CQ5TAP6 766 aaKnown RBP11.21□□□□□ -0.61
HDLBP-209ENST00000422933 LHX8Q68G74 356 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 HAS1Q92839 578 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 CALML4Q96GE6 196 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 GPR20Q99678 358 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 MTG1Q9BT17 334 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-209ENST00000422933 SEZ6LQ9BYH1 1024 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 ZNF302Q9NR11 478 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 ERAP1Q9NZ08 941 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 OGDHLQ9ULD0 1010 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 ZDHHC9Q9Y397 364 aa11.21□□□□□ -0.61
HDLBP-209ENST00000422933 SZT2Q5T011 3432 aa11.21□□□□□ -0.62
HDLBP-209ENST00000422933 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 DHX15O43143 795 aaKnown RBP11.2□□□□□ -0.62
HDLBP-209ENST00000422933 SLC26A4O43511 780 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 EDIL3O43854 480 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 CUTAO60888 179 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 P4HBP07237 508 aaKnown RBP11.2□□□□□ -0.62
HDLBP-209ENST00000422933 SUPT20HL2P0C7V6 817 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 MARCKSP29966 332 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-209ENST00000422933 STAT5BP51692 787 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 CHMP4BP1P59074 171 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 NKX3-2P78367 333 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 BEX3Q00994 111 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 LRRC41Q15345 812 aa11.2□□□□□ -0.62
HDLBP-209ENST00000422933 HSDL1Q3SXM5 330 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms