RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ADGRE1Q14246 886 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 TCTN1Q2MV58 587 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 PPP1R18Q6NYC8 613 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 MICALL1Q8N3F8 863 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 CYP2W1Q8TAV3 490 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 ANO3Q9BYT9 981 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 ABHD14A-ACY1A0A1B0GW23 586 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 hCG_1984214I3L0E3 225 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 LGR5O75473 907 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 CXCL10P02778 98 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 CTSHP09668 335 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 ARP10275 920 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 SCG2P13521 617 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 WDR5P61964 334 aaKnown RBP10.61□□□□□ -0.71
NUP50-206ENST00000422489 IGBP1P78318 339 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 CCT2P78371 535 aaKnown RBP10.61□□□□□ -0.71
NUP50-206ENST00000422489 DEFB103AP81534 67 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 RBL2Q08999 1139 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 PFKFB3Q16875 520 aaPredicted RBP10.61□□□□□ -0.71
NUP50-206ENST00000422489 TRAF7Q6Q0C0 670 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 ZNF713Q8N859 430 aaPredicted RBP10.61□□□□□ -0.71
NUP50-206ENST00000422489 USP38Q8NB14 1042 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 DBF4BQ8NFT6 615 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 ARNTL2Q8WYA1 636 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 PHKBQ93100 1093 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 UIMC1Q96RL1 719 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 SDF4Q9BRK5 362 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 LARP6Q9BRS8 491 aaKnown RBP10.61□□□□□ -0.71
NUP50-206ENST00000422489 GLT8D2Q9H1C3 349 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 SMARCAD1Q9H4L7 1026 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 C6orf50Q9HD87 102 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 PRDM6Q9NQX0 595 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 KCNH7Q9NS40 1196 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 ERAP1Q9NZ08 941 aa10.61□□□□□ -0.71
NUP50-206ENST00000422489 NRCAMQ92823 1304 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 DDX39AO00148 427 aaKnown RBP10.6□□□□□ -0.71
NUP50-206ENST00000422489 PRPF3O43395 683 aaKnown RBP10.6□□□□□ -0.71
NUP50-206ENST00000422489 RCAN1P53805 252 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 PPFIA1Q13136 1202 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 MBTPS1Q14703 1052 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 CEP55Q53EZ4 464 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.6□□□□□ -0.71
NUP50-206ENST00000422489 LMBR1Q8WVP7 490 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 SEPT8Q92599 483 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 SLC26A6Q9BXS9 759 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 AZI2Q9H6S1 392 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 JPH1Q9HDC5 661 aaPredicted RBP10.6□□□□□ -0.71
NUP50-206ENST00000422489 SLC9A2Q9UBY0 812 aa10.6□□□□□ -0.71
NUP50-206ENST00000422489 EMSYQ7Z589 1322 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 MEIS1O00470 390 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 EFCAB14O75071 495 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 ARHGEF15O94989 841 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 UPP2O95045 317 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 AMHP03971 560 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 PDIA3P30101 505 aaKnown RBP10.59□□□□□ -0.71
NUP50-206ENST00000422489 TAP1Q03518 808 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 AP3B2Q13367 1082 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 SKIV2LQ15477 1246 aaKnown RBP10.59□□□□□ -0.71
NUP50-206ENST00000422489 GRIK4Q16099 956 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 PKN1Q16512 942 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 RUFY4Q6ZNE9 571 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 RUFY3Q7L099 469 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 RSPH3Q86UC2 560 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 PLA2G4DQ86XP0 818 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 MYOCDQ8IZQ8 938 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 CCDC12Q8WUD4 166 aaPredicted RBP10.59□□□□□ -0.71
NUP50-206ENST00000422489 RAD9AQ99638 391 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 COL25A1Q9BXS0 654 aaPredicted RBP10.59□□□□□ -0.71
NUP50-206ENST00000422489 NCOA5Q9HCD5 579 aaKnown RBP10.59□□□□□ -0.71
NUP50-206ENST00000422489 AGO4Q9HCK5 861 aaKnown RBP10.59□□□□□ -0.71
NUP50-206ENST00000422489 PPP4R2Q9NY27 417 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 MTUS1Q9ULD2 1270 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 CYP46A1Q9Y6A2 500 aa10.59□□□□□ -0.71
NUP50-206ENST00000422489 LCHNA4D1U4 455 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 BACH1O14867 736 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 ADAMTS3O15072 1205 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
NUP50-206ENST00000422489 INSRRP14616 1297 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 GNA11P29992 359 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 HOXC8P31273 242 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 SREBF1P36956 1147 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 CLK2P49760 499 aaKnown RBP10.58□□□□□ -0.72
NUP50-206ENST00000422489 STAT5BP51692 787 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 ACTR2P61160 394 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 STK3Q13188 491 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 ITGB3BPQ13352 177 aaPredicted RBP10.58□□□□□ -0.72
NUP50-206ENST00000422489 PLEKHG4Q58EX7 1191 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 MCTP2Q6DN12 878 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 DNAJB3Q8WWF6 145 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 TNPO1Q92973 898 aaKnown RBP10.58□□□□□ -0.72
NUP50-206ENST00000422489 ZBTB10Q96DT7 871 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 PCYT2Q99447 389 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 OSBPL7Q9BZF2 842 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
NUP50-206ENST00000422489 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 LAMA3Q16787 3333 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 NFASCO94856 1347 aa10.58□□□□□ -0.72
NUP50-206ENST00000422489 BAZ2BQ9UIF8 2168 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms