RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CCDC65Q8IXS2 484 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 LSM14BQ9BX40 385 aaKnown RBP12.06□□□□□ -0.48
BEST1-201ENST00000378043 ANO3Q9BYT9 981 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 EMILIN3Q9NT22 766 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 FAM184BQ9ULE4 1060 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 RPS6KA5O75582 802 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 SERPING1P05155 500 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.48
BEST1-201ENST00000378043 PSMC6P62333 389 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 SFMBT2Q5VUG0 894 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 HAUS3Q68CZ6 603 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 DPY19L2P1Q6NXN4 242 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 RNF10Q8N5U6 811 aaKnown RBP12.06□□□□□ -0.48
BEST1-201ENST00000378043 ETNPPLQ8TBG4 499 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 MKL1Q969V6 931 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 MS4A14Q96JA4 679 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 NOX5Q96PH1 765 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 EHD4Q9H223 541 aa12.06□□□□□ -0.48
BEST1-201ENST00000378043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48
BEST1-201ENST00000378043 A0A087X0T9 212 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 FAM228BP0C875 321 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 HOXD13P35453 343 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 CATSPER3Q86XQ3 398 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 TEKT1Q969V4 418 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 LENG9Q96B70 501 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 GANQ9H2C0 597 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 RBM12Q9NTZ6 932 aaKnown RBP12.05□□□□□ -0.48
BEST1-201ENST00000378043 LCMT1Q9UIC8 334 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 DDTLA6NHG4 134 aaPredicted RBP12.05□□□□□ -0.48
BEST1-201ENST00000378043 GNA14O95837 355 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 HLA-DOAP06340 250 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 SPATA31C1P0DKV0 1188 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 KLRC1P26715 233 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 ADAM9Q13443 819 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 CDC37Q16543 378 aaPredicted RBP12.05□□□□□ -0.48
BEST1-201ENST00000378043 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 TBC1D5Q92609 795 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 CCDC17Q96LX7 622 aa12.05□□□□□ -0.48
BEST1-201ENST00000378043 NUCKS1Q9H1E3 243 aaKnown RBP12.05□□□□□ -0.48
BEST1-201ENST00000378043 DHX36Q9H2U1 1008 aaKnown RBP12.05□□□□□ -0.48
BEST1-201ENST00000378043 PITPNM2Q9BZ72 1349 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 RAD21O60216 631 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 SNAP25P60880 206 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 ARHGAP4P98171 946 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 TCP10Q12799 353 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 NAB2Q15742 525 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 SLC18A3Q16572 532 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 LRRC31Q6UY01 552 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 SH3BP5LQ7L8J4 393 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 NAP1L4Q99733 375 aaKnown RBP12.04□□□□□ -0.48
BEST1-201ENST00000378043 PACSIN1Q9BY11 444 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 AIPL1Q9NZN9 384 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 SCN9AQ15858 1988 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 CRKP46108 304 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 ARID5AQ03989 594 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 KCNH2Q12809 1159 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 GIT2Q14161 759 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 EDRF1Q3B7T1 1238 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 SLFN13Q68D06 897 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 LEKR1Q6ZMV7 388 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 SND1Q7KZF4 910 aaKnown RBP eCLIP12.04□□□□□ -0.48
BEST1-201ENST00000378043 FAM133AQ8N9E0 248 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 BCAS3Q9H6U6 928 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 STIM2Q9P246 746 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 ADAMTS1Q9UHI8 967 aa12.04□□□□□ -0.48
BEST1-201ENST00000378043 FAM86B1E9PN63 330 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 MEIS1O00470 390 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 PALMO75781 387 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 FAM86B2P0C5J1 330 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 TAL1P17542 331 aaPredicted RBP12.03□□□□□ -0.48
BEST1-201ENST00000378043 NR2F2P24468 414 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 RAPGEF1Q13905 1077 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 PRR16Q569H4 304 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 MOXD1Q6UVY6 613 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 SLFN12Q8IYM2 578 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 AFAP1L1Q8TED9 768 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 RUBCNQ92622 972 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 ZDHHC15Q96MV8 337 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 ZHX3Q9H4I2 956 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 NYAP2Q9P242 653 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 PCDHGC5Q9Y5F6 944 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 GOLGA6BA6NDN3 693 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 ACTN1P12814 892 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
BEST1-201ENST00000378043 CCDC181Q5TID7 509 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 CCDC70Q6NSX1 233 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 EPM2AIP1Q7L775 607 aaPredicted RBP12.03□□□□□ -0.48
BEST1-201ENST00000378043 DCAF4Q8WV16 495 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 REEP2Q9BRK0 252 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 KIF13BQ9NQT8 1826 aa12.03□□□□□ -0.48
BEST1-201ENST00000378043 SLC26A4O43511 780 aa12.02□□□□□ -0.48
BEST1-201ENST00000378043 FTCDO95954 541 aa12.02□□□□□ -0.48
BEST1-201ENST00000378043 SLC9A1P19634 815 aa12.02□□□□□ -0.48
BEST1-201ENST00000378043 NAP1L1P55209 391 aaKnown RBP12.02□□□□□ -0.48
BEST1-201ENST00000378043 ENOX2Q16206 610 aaKnown RBP12.02□□□□□ -0.48
BEST1-201ENST00000378043 CERKLQ49MI3 558 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms