RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CAMTA2O94983 1202 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 GSNP06396 782 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 PDE6BP35913 854 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 KIR2DL1P43626 348 aaPredicted RBP6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 KIR2DL2P43627 348 aaPredicted RBP6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 ZYXQ15942 572 aaKnown RBP6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 PKN1Q16512 942 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 MLANAQ16655 118 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 RUFY4Q6ZNE9 571 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 CNBD1Q8NA66 436 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 LIN37Q96GY3 246 aaPredicted RBP6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 MAP6Q96JE9 813 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 CFAP53Q96M91 514 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 SLC38A3Q99624 504 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 BRIP1Q9BX63 1249 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 ZMYM5Q9UJ78 669 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 USP16Q9Y5T5 823 aa6.86□□□□□ -1.31
RNU4-4P-201ENST00000364588 SHOXO15266 292 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 FKTNO75072 461 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 ZNF205O95201 554 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 U2AF1L5P0DN76 240 aaPredicted RBP6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 ITGA4P13612 1032 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 ERVFC1P60507 584 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 ST5P78524 1137 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 U2AF1Q01081 240 aaKnown RBP eCLIP6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 DCTN1Q14203 1278 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 SNX17Q15036 470 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 NOL9Q5SY16 702 aaKnown RBP6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 CRTC3Q6UUV7 619 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 MCM10Q7L590 875 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 VPS37DQ86XT2 251 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 KSR1Q8IVT5 923 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 JMYQ8N9B5 988 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 BHLHE22Q8NFJ8 381 aaPredicted RBP6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 SHDQ96IW2 340 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 FAM84AQ96KN4 292 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 PPP1R16BQ96T49 567 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 KRTAP4-12Q9BQ66 201 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 SLC6A17Q9H1V8 727 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 PODXL2Q9NZ53 605 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 FHOD1Q9Y613 1164 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 ARFGEF2Q9Y6D5 1785 aa6.85□□□□□ -1.31
RNU4-4P-201ENST00000364588 TMEM82A0PJX8 343 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 MEIS1O00470 390 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 DDNO94850 711 aaPredicted RBP6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 SRGNP10124 158 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 RBM25P49756 843 aaKnown RBP6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 TCEAL1Q15170 157 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 AXDND1Q5T1B0 1012 aaPredicted RBP6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 DCAF15Q66K64 600 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 NBPF5PQ86XG9 351 aaPredicted RBP6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 IRF2BP1Q8IU81 584 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 G6PC3Q9BUM1 346 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 RNF32Q9H0A6 362 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 GBP3Q9H0R5 595 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 TAOK3Q9H2K8 898 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 EPB41L4BQ9H329 900 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 GP6Q9HCN6 339 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 GPR160Q9UJ42 338 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 NUDCQ9Y266 331 aa6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 SF3B6Q9Y3B4 125 aaKnown RBP6.84□□□□□ -1.31
RNU4-4P-201ENST00000364588 DLG5Q8TDM6 1919 aa6.84□□□□□ -1.32
RNU4-4P-201ENST00000364588 USP2O75604 605 aaPredicted RBP6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 TP53P04637 393 aaPredicted RBP6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 SNRPA1P09661 255 aaKnown RBP6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 PPP2R1AP30153 589 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 CTSKP43235 329 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 SLC7A5Q01650 507 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 STYK1Q6J9G0 422 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 MASTLQ96GX5 879 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 HAUS7Q99871 368 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 CDADC1Q9BWV3 514 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 SP110Q9HB58 689 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 MIS18AQ9NYP9 233 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 WHRNQ9P202 907 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 TNFRSF10DQ9UBN6 386 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 PCNTO95613 3336 aa6.83□□□□□ -1.32
RNU4-4P-201ENST00000364588 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 LTBP3Q9NS15 1303 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 A0A1W2PQH9 124 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 C8AP07357 584 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 HSPA1AP0DMV8 641 aaKnown RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 HSPA1BP0DMV9 641 aaKnown RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 NAT2P11245 290 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 ATF4P18848 351 aaPredicted RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 CD247P20963 164 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 TRHRP34981 398 aaPredicted RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 CASP7P55210 303 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 SLC14A2Q15849 920 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 PPP2R5EQ16537 467 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 GNPTABQ3T906 1256 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 ZNF648Q5T619 568 aaPredicted RBP6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 OLFM4Q6UX06 510 aa6.82□□□□□ -1.32
RNU4-4P-201ENST00000364588 PRR23BQ6ZRT6 265 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms