RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 ATP6V0A2Q9Y487 856 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 ADRA2BP18089 450 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 KLRC1P26715 233 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 PSEN1P49768 467 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 QRICH1Q2TAL8 776 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 STIM2Q9P246 746 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 A0A087X0T9 212 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 FAM196BA6NMK8 535 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 PALMO75781 387 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 FTCDO95954 541 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 FAM228BP0C875 321 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 HOXA7P31268 230 aaPredicted RBP17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 PAFAH1B1P43034 410 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 CASP5P51878 434 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 PACSIN1Q9BY11 444 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 ZHX3Q9H4I2 956 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 KDM3AQ9Y4C1 1321 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 POTEFA5A3E0 1075 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 POTEIP0CG38 1075 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 MARSP56192 900 aaKnown RBP17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 ADAM9Q13443 819 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 RAPGEF1Q13905 1077 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 POTEGQ6S5H5 508 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 POTEEQ6S8J3 1075 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 HOMEZQ8IX15 550 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 COA1Q9GZY4 146 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 DNAJC18Q9H819 358 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 EFCC1Q9HA90 598 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 ADAMTS1Q9UHI8 967 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 PCDHA1Q9Y5I3 950 aa17.12■□□□□ 0.33
CNKSR1-201ENST00000361530 ARFGEF1Q9Y6D6 1849 aa17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 PSMC6P62333 389 aa17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 NAB2Q15742 525 aa17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 ARHGAP27Q6ZUM4 889 aa17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 FAM133AQ8N9E0 248 aa17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 PACSIN2Q9UNF0 486 aaPredicted RBP17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 SLC12A3P55017 1021 aa17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 SLC18A3Q16572 532 aa17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 APOBEC3HQ6NTF7 200 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 ANO3Q9BYT9 981 aa17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 NUCKS1Q9H1E3 243 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-201ENST00000361530 ZSCAN5CA6NGD5 496 aaPredicted RBP17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 PPEF1O14829 653 aaPredicted RBP17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 GNA14O95837 355 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 GLI1P08151 1106 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 ACTN1P12814 892 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 SNAP25P60880 206 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 KCNH2Q12809 1159 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 C8orf74Q6P047 294 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 SP8Q8IXZ3 490 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 GANQ9H2C0 597 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 GOLGA6CA6NDK9 693 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 MEIS1O00470 390 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 GOLGA6DP0CG33 693 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 CACNB3P54284 484 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 CFAP221Q4G0U5 840 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 CATSPER3Q86XQ3 398 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 DHX36Q9H2U1 1008 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 GOLGA6AQ9NYA3 693 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
CNKSR1-201ENST00000361530 FRMD3A2A2Y4 597 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 MEIS2O14770 477 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 KRT18P05783 430 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 MAGEA9P43362 315 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 NOP2P46087 812 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 USP11P51784 963 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 SPIRE1Q08AE8 756 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 KLHL30Q0D2K2 578 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 KIAA0753Q2KHM9 967 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 TTC31Q49AM3 519 aaPredicted RBP17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 FAM76AQ8TAV0 307 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 RUBCNQ92622 972 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 ZC3H12CQ9C0D7 883 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 AIPL1Q9NZN9 384 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 SUGT1Q9Y2Z0 365 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 LTBP1Q14766 1721 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 CYP3A7-CYP3A51PA0A087WV96 503 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 ESYT3A0FGR9 886 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 EEF2P13639 858 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 CYP3A7P24462 503 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 NR2F2P24468 414 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 HOXD13P35453 343 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 EPHB4P54760 987 aa17.09■□□□□ 0.33
CNKSR1-201ENST00000361530 RNASE9P60153 205 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms