RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 DDX56Q9NY93 547 aaKnown RBP6.25□□□□□ -1.41
BRCA1-203ENST00000357654 VPS54Q9P1Q0 977 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 SNX6Q9UNH7 406 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 PCDHB9Q9Y5E1 797 aa6.25□□□□□ -1.41
BRCA1-203ENST00000357654 KCNK3O14649 394 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 C21orf2O43822 256 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 TRPC1P48995 793 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 CEP85Q6P2H3 762 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 ARMCX2Q7L311 632 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 RMDN1Q96DB5 314 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 AHCYL2Q96HN2 611 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 HES6Q96HZ4 224 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 SEPT5Q99719 369 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 MIS12Q9H081 205 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 UTP6Q9NYH9 597 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 GTSE1Q9NYZ3 720 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 AQRO60306 1485 aaKnown RBP eCLIP6.24□□□□□ -1.414e-10■■■■■ 36.9
BRCA1-203ENST00000357654 PRR23D1E9PI22 279 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 TNPO2O14787 897 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PDE8AO60658 829 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PRR23D2P0DMB1 279 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PBLDP30039 288 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 SOAT1P35610 550 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 UBE2HP62256 183 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 MYL7Q01449 175 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 TBC1D9Q6ZT07 1266 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 GRK7Q8WTQ7 553 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 XAGE2Q96GT9 111 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 Q9H521 79 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 RGS16O15492 202 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 HSPA6P17066 643 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 SOX11P35716 441 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 SLC16A2P36021 539 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 USP14P54578 494 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 GRIN1Q05586 938 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 IDI1Q13907 227 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 CTTNQ14247 550 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 MESDQ14696 234 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PAN2Q504Q3 1202 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 OTUB1Q96FW1 271 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PAWRQ96IZ0 340 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 RPAP3Q9H6T3 665 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 VPS8Q8N3P4 1428 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 ANKRD50Q9ULJ7 1429 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 MYO1DO94832 1006 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 XRCC5P13010 732 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PLCL1Q15111 1095 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 SLFN13Q68D06 897 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 MFN1Q8IWA4 741 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 TBC1D22AQ8WUA7 517 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PARVBQ9HBI1 364 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 FANCIQ9NVI1 1328 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 EGFRP00533 1210 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 GSNP06396 782 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 CARSP49589 748 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 ATN1P54259 1190 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 LMNB2Q03252 620 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 KRT25Q7Z3Z0 450 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 HAUS6Q7Z4H7 955 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 HIPK4Q8NE63 616 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 GJA10Q969M2 543 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 SIK2Q9H0K1 926 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 BAIAP2L1Q9UHR4 511 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 AATKQ6ZMQ8 1374 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 EPRSP07814 1512 aaKnown RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 A0A087X0T9 212 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 MEIS1O00470 390 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PJA2O43164 708 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 PRPSAP2O60256 369 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 ARHGAP25P42331 645 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 POU5F1BQ06416 359 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 KRT72Q14CN4 511 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 AKAP4Q5JQC9 854 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 GJC2Q5T442 439 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-203ENST00000357654 LRRC31Q6UY01 552 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 KRT26Q7Z3Y9 468 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 KLHDC4Q8TBB5 520 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 GLT8D2Q9H1C3 349 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 SH3BP1Q9Y3L3 701 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 DTNAQ9Y4J8 743 aa6.24□□□□□ -1.41
BRCA1-203ENST00000357654 IGSF3O75054 1194 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 TADA2AO75478 443 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 A1BGP04217 495 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 ERVK-10P10266 1014 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 ADORA2BP29275 332 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 WEE1P30291 646 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 GYG1P46976 350 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 TMED1Q13445 227 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 SLC27A3Q5K4L6 730 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 TBC1D1Q86TI0 1168 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 CACUL1Q86Y37 369 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 REXO1Q8N1G1 1221 aaKnown RBP6.23□□□□□ -1.41
BRCA1-203ENST00000357654 CYTH2Q99418 400 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 MUC3BQ9H195 1237 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 GOLGA8IPA6NC78 632 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 GOLGA8JA6NMD2 632 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 C5orf58C9J3I9 102 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 NDUFAB1O14561 156 aa6.23□□□□□ -1.41
BRCA1-203ENST00000357654 SCG2P13521 617 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms