RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ZBED2Q9BTP6 218 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 YIPF3Q9GZM5 350 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 AP5M1Q9H0R1 490 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 XPOTO43592 962 aaKnown RBP17.64■□□□□ 0.41
PTCH1-201ENST00000331920 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 ZFP42Q96MM3 310 aa17.64■□□□□ 0.41
PTCH1-201ENST00000331920 GOLGA8MH3BSY2 632 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 TCP1P17987 556 aaKnown RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 CAPZA2P47755 286 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 CCDC15Q0P6D6 951 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 APPBP2Q92624 585 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 RRAGDQ9NQL2 400 aaPredicted RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 PPARGC1AQ9UBK2 798 aaKnown RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 ATP8B3O60423 1300 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 ACCSLQ4AC99 568 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 C1orf146Q5VVC0 180 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 FASTKD5Q7L8L6 764 aaKnown RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 H2AFZP0C0S5 128 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 HDAC4P56524 1084 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 GTF2IP78347 998 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 TFDP1Q14186 410 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 MORF4L2Q15014 288 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 BTNL9Q6UXG8 535 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 H2AFVQ71UI9 128 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 C11orf74Q86VG3 221 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 PIK3R5Q8WYR1 880 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 DCPSQ96C86 337 aaKnown RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 FAF2Q96CS3 445 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 GSPT1P15170 499 aaKnown RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 POU5F1BQ06416 359 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 TAF1BQ53T94 588 aaPredicted RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 DNAJC24Q6P3W2 148 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 RUBCNLQ9H714 662 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 DONSONQ9NYP3 566 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 KIAA1024Q9UPX6 916 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 LZTS3O60299 673 aaPredicted RBP17.63■□□□□ 0.41
PTCH1-201ENST00000331920 DCTN3O75935 186 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 NDUFAF2Q8N183 169 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 PLCH2O75038 1416 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 CLIC2O15247 247 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 APOA1P02647 267 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 PPP1R14AQ96A00 147 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 ADNPQ9H2P0 1102 aa17.63■□□□□ 0.41
PTCH1-201ENST00000331920 NT5C1BQ96P26 610 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 SNX14Q9Y5W7 946 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 IFNLR1Q8IU57 520 aaPredicted RBP17.62■□□□□ 0.41
PTCH1-201ENST00000331920 CNOT6LQ96LI5 555 aaKnown RBP17.62■□□□□ 0.41
PTCH1-201ENST00000331920 USP28Q96RU2 1077 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 TMEM161AQ9NX61 479 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
PTCH1-201ENST00000331920 PRG4Q92954 1404 aaPredicted RBP17.62■□□□□ 0.41
PTCH1-201ENST00000331920 RASGRF2O14827 1237 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 GUCA1CO95843 209 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 TMPRSS15P98073 1019 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 KRT24Q2M2I5 525 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 THEMIS2Q5TEJ8 643 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 TUBB6Q9BUF5 446 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 NRBP2Q9NSY0 501 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 TRAF3IP3Q9Y228 551 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 BCS1LQ9Y276 419 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 TRAF7Q6Q0C0 670 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 CCDC51Q96ER9 411 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 SATB2Q9UPW6 733 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 SKIV2LQ15477 1246 aaKnown RBP17.62■□□□□ 0.41
PTCH1-201ENST00000331920 CHMP1BQ7LBR1 199 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 SPICE1Q8N0Z3 855 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 PBXIP1Q96AQ6 731 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 SRGAP2CP0DJJ0 459 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 RECQLP46063 649 aaPredicted RBP17.62■□□□□ 0.41
PTCH1-201ENST00000331920 OR6B2Q6IFH4 312 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 LINS1Q8NG48 757 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 MTBPQ96DY7 904 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 AP1M1Q9BXS5 423 aa17.62■□□□□ 0.41
PTCH1-201ENST00000331920 MED7O43513 233 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 C6orf118Q5T5N4 469 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 EFTUD2Q15029 972 aaKnown RBP eCLIP17.61■□□□□ 0.41
PTCH1-201ENST00000331920 STXBP2Q15833 593 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 RETREG2Q8NC44 543 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 EHBP1L1Q8N3D4 1523 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 LRRC74AQ0VAA2 488 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 BBS9Q3SYG4 887 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 ATP6V0A4Q9HBG4 840 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 UBE2TQ9NPD8 197 aaPredicted RBP17.61■□□□□ 0.41
PTCH1-201ENST00000331920 H0YCG3 227 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 ZBED1O96006 694 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 FBXO11Q86XK2 927 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 EGFL8Q99944 293 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 KMT5AQ9NQR1 393 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 HPCAL4Q9UM19 191 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
PTCH1-201ENST00000331920 BLIDQ8IZY5 108 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 AGR3Q8TD06 166 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 COL4A3BPQ9Y5P4 624 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 EPN1Q9Y6I3 576 aaPredicted RBP17.61■□□□□ 0.41
PTCH1-201ENST00000331920 ACAD11Q709F0 780 aa17.61■□□□□ 0.41
PTCH1-201ENST00000331920 PFKFB1P16118 471 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms