RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 FAM196AQ6ZSG2 479 aa19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 ZNF572Q7Z3I7 529 aaPredicted RBP19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 SCFD1Q8WVM8 642 aa19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 GEMIN8Q9NWZ8 242 aaKnown RBP19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 GGA1Q9UJY5 639 aa19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 SHOX2O60902 331 aaPredicted RBP19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 PDIA5Q14554 519 aa19.12■□□□□ 0.65
PTP4A3-201ENST00000329397 KRT18P05783 430 aaKnown RBP19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 PLA2G4BP0C869 781 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 KLHL30Q0D2K2 578 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 RIC8AQ9NPQ8 531 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 ATP6V0A2Q9Y487 856 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 SSU72P8A0A1W2PR75 194 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 ZEB2O60315 1214 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 HSF2BPO75031 334 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 SERPING1P05155 500 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 SLC9A1P19634 815 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 EPS15P42566 896 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 ZNF543Q08ER8 600 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 SH3GL2Q99962 352 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 IKZF4Q9H2S9 585 aa19.11■□□□□ 0.65
PTP4A3-201ENST00000329397 MAGEA9P43362 315 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 PSMC6P62333 389 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 PPFIA1Q13136 1202 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 ASPRV1Q53RT3 343 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 PSTPIP2Q9H939 334 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 LOC102724159A0A0B4J2E5 919 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 PNMA6FA0A0J9YX94 578 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 GRID2IPA4D2P6 1211 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 MED24O75448 989 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 LIG3P49916 1009 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 ITIH3Q06033 890 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 ADAM9Q13443 819 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 PWP2Q15269 919 aaKnown RBP19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 TRAPPC3LQ5T215 181 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 RC3H1Q5TC82 1133 aaKnown RBP19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 SLC30A10Q6XR72 485 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 EGFL6Q8IUX8 553 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 TRIM59Q8IWR1 403 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 CASKIN2Q8WXE0 1202 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 CUL5Q93034 780 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 IQCDQ96DY2 449 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 ARFGEF1Q9Y6D6 1849 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 EMBQ6PCB8 327 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 EMILIN3Q9NT22 766 aa19.1■□□□□ 0.65
PTP4A3-201ENST00000329397 ABCB11O95342 1321 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 ZNF233A6NK53 670 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 CACNB3P54284 484 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 PTK2Q05397 1052 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 KCNH2Q12809 1159 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 NAB2Q15742 525 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 SLC18A3Q16572 532 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 PCDHA2Q9Y5H9 948 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 KCNK3O14649 394 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 EIF3HO15372 352 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 RAD51CO43502 376 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 PLCG2P16885 1265 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 CYP11B2P19099 503 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 NR2F2P24468 414 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 PABPC4Q13310 644 aaKnown RBP eCLIP19.09■□□□□ 0.652e-15■■□□□ 14.1
PTP4A3-201ENST00000329397 NNTQ13423 1086 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 ARSHQ5FYA8 562 aa19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 DCAF17Q5H9S7 520 aaPredicted RBP19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 DDX42Q86XP3 938 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 BMP2KQ9NSY1 1161 aaPredicted RBP19.09■□□□□ 0.65
PTP4A3-201ENST00000329397 TTLL1O95922 423 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 IL1R1P14778 569 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 SMARCA1P28370 1054 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 CLK2P49760 499 aaKnown RBP19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 GUCY1A3Q02108 690 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 PSMD2Q13200 908 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 PPP4R3AQ6IN85 833 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 GJB7Q6PEY0 223 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 PROM2Q8N271 834 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 MICALL1Q8N3F8 863 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 TBC1D16Q8TBP0 767 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 AP1M1Q9BXS5 423 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 KCTD10Q9H3F6 313 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 CENPHQ9H3R5 247 aa19.08■□□□□ 0.65
PTP4A3-201ENST00000329397 BTAF1O14981 1849 aa19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 GOLGA8KD6RF30 607 aa19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 RBAK-RBAKDNI3L0D1 243 aa19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 SNHG28P0DPA3 235 aa19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 GABPAQ06546 454 aa19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 ASIC2Q16515 512 aa19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 TTC31Q49AM3 519 aaPredicted RBP19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 NGLY1Q96IV0 654 aa19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 INPP4AQ96PE3 977 aaPredicted RBP19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 P2RX7Q99572 595 aaKnown RBP19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 YY1AP1Q9H869 796 aa19.08■□□□□ 0.64
PTP4A3-201ENST00000329397 AHDC1Q5TGY3 1603 aaPredicted RBP19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 RSPH10B2B2RC85 870 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 OPA1O60313 960 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 RSPH10BP0C881 870 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 NOP2P46087 812 aaKnown RBP19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 NOVP48745 357 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 CYP4A11Q02928 519 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 ORC2Q13416 577 aaPredicted RBP19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 CFAP58Q5T655 872 aa19.07■□□□□ 0.64
PTP4A3-201ENST00000329397 TCERG1LQ5VWI1 586 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms