RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ST13P4Q8IZP2 240 aaPredicted RBP17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 ZNF577Q9BSK1 485 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 CCPG1Q9ULG6 757 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 PALMO75781 387 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 MX2P20592 715 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 POLD1P28340 1107 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 UBE2SQ16763 222 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 ANO3Q9BYT9 981 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 USP17L3A6NCW0 530 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 USP17L4A6NCW7 530 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 SPECC1L-ADORA2AF8WAN1 911 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 USPL1Q5W0Q7 1092 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 RINT1Q6NUQ1 792 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 USP17L1Q7RTZ2 530 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 MAP7D3Q8IWC1 876 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 FAM167BQ9BTA0 163 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 INTUQ9ULD6 942 aa17.78■□□□□ 0.44
SH3RF1-201ENST00000284637 LMNAP02545 664 aaKnown RBP17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 HSPA6P17066 643 aa17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 RASGRF1Q13972 1273 aa17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 EPHA10Q5JZY3 1008 aa17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 MED10Q9BTT4 135 aa17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 ATG3Q9NT62 314 aa17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 BASP1P80723 227 aaKnown RBP17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 CUL1Q13616 776 aa17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 E4F1Q66K89 784 aaPredicted RBP17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 JADE1Q6IE81 842 aa17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 METP08581 1390 aa17.77■□□□□ 0.44
SH3RF1-201ENST00000284637 ABCA5Q8WWZ7 1642 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 TEX33O43247 280 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 TTLL1O95922 423 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 MT-ND3P03897 115 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 CA4P22748 312 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 ALDH1B1P30837 517 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 CCZ1BP86790 482 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 CCZ1P86791 482 aaPredicted RBP17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 C10orf76Q5T2E6 689 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 ARL6IP4Q66PJ3 421 aaKnown RBP17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 HDAC6Q9UBN7 1215 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 ENO4A6NNW6 628 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 KRT1P04264 644 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 DTNBP1Q96EV8 351 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 ZNF408Q9H9D4 720 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 SNX24Q9Y343 169 aa17.77■□□□□ 0.43
SH3RF1-201ENST00000284637 ESYT3A0FGR9 886 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 SEMA3EO15041 775 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 USP14P54578 494 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 LRRC63Q05C16 580 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 ECE1P42892 770 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 PLA2G4AP47712 749 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 VSNL1P62760 191 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 DHX40Q8IX18 779 aaKnown RBP17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 MORC4Q8TE76 937 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 NLRP7Q8WX94 980 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 PAGR1Q9BTK6 254 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 TUBB6Q9BUF5 446 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 ADGRG1Q9Y653 693 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 LGALS16A8MUM7 142 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 GARSP41250 739 aaKnown RBP17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 ITKQ08881 620 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 PDZD8Q8NEN9 1154 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 STRBPQ96SI9 672 aaKnown RBP17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 MCF2L2Q86YR7 1114 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 TBC1D10CQ8IV04 446 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 ARHGAP18Q8N392 663 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 MCUQ8NE86 351 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 ACCSQ96QU6 501 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 STOML1Q9UBI4 398 aa17.76■□□□□ 0.43
SH3RF1-201ENST00000284637 A6NJR5 290 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 MMEP08473 750 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 MCAMP43121 646 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 PSMD2Q13200 908 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 C6orf118Q5T5N4 469 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 TRIM11Q96F44 468 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 YEATS2Q9ULM3 1422 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 HDLBPQ00341 1268 aaKnown RBP17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 PPWD1Q96BP3 646 aaKnown RBP17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 MIS12Q9H081 205 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 CLASP1Q7Z460 1538 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 LOC102724428A0A0B4J2F2 783 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 ANO9A1A5B4 782 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 SIK1P57059 783 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 IFRD2Q12894 506 aaPredicted RBP17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 RAPH1Q70E73 1250 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 NLRP10Q86W26 655 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 OXER1Q8TDS5 423 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 ANGPTL2Q9UKU9 493 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 EIF3HO15372 352 aaKnown RBP eCLIP17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 MXI1P50539 228 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 RWDD2BP57060 319 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 CRYMQ14894 314 aa17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 PDZD4Q76G19 769 aaPredicted RBP17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.75■□□□□ 0.43
SH3RF1-201ENST00000284637 PRCPP42785 496 aa17.74■□□□□ 0.43
SH3RF1-201ENST00000284637 BBS9Q3SYG4 887 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms