RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 DR1Q01658 176 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 TTI2Q6NXR4 508 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 TMEM154Q6P9G4 183 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 MYOCDQ8IZQ8 938 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 DTX3LQ8TDB6 740 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
GPC1-201ENST00000264039 CNGA1P29973 690 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 SLC29A2Q14542 456 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 RDH13Q8NBN7 331 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 MCUR1Q96AQ8 359 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
GPC1-201ENST00000264039 ACTN1P12814 892 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 GYG1P46976 350 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 PDXDC2PQ6P474 469 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 SEPT14Q6ZU15 432 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 OR52Z1P0C646 297 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 NQO1P15559 274 aaKnown RBP17.7■□□□□ 0.42
GPC1-201ENST00000264039 TFAP4Q01664 338 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
GPC1-201ENST00000264039 RCSD1Q6JBY9 416 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 SCYL3Q8IZE3 742 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 SRBD1Q8N5C6 995 aaKnown RBP17.7■□□□□ 0.42
GPC1-201ENST00000264039 ISCUQ9H1K1 167 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 CIAO1O76071 339 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 STARD3NLO95772 234 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 BAG2O95816 211 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 ADAM9Q13443 819 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 VPS52Q8N1B4 723 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 FAM114A2Q9NRY5 505 aa17.7■□□□□ 0.42
GPC1-201ENST00000264039 WDR91A4D1P6 747 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 SPOPO43791 374 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 ALDH3A1P30838 453 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 MRPL12P52815 198 aaKnown RBP17.69■□□□□ 0.42
GPC1-201ENST00000264039 PMS2P54278 862 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 ANKRD20A2Q5SQ80 823 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 ANKRD20A1Q5TYW2 823 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 ANKRD20A3Q5VUR7 823 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 SPATA20Q8TB22 786 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 ZNF483Q8TF39 744 aaPredicted RBP17.69■□□□□ 0.42
GPC1-201ENST00000264039 TATDN2Q93075 761 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 MYH8P13535 1937 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 GFPT2O94808 682 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 LONRF1Q17RB8 773 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 DNAJC10Q8IXB1 793 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 TRIM9Q9C026 710 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 ETAA1Q9NY74 926 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 TMOD4Q9NZQ9 345 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 CHORDC1Q9UHD1 332 aaPredicted RBP17.69■□□□□ 0.42
GPC1-201ENST00000264039 NEURL4Q96JN8 1562 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 RASSF10A6NK89 507 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
GPC1-201ENST00000264039 CAVIN4Q5BKX8 364 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 PDXDC1Q6P996 788 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 SH3RF1Q7Z6J0 888 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 ELOA2Q8IYF1 753 aaPredicted RBP17.69■□□□□ 0.42
GPC1-201ENST00000264039 EPS8L3Q8TE67 593 aaKnown RBP17.69■□□□□ 0.42
GPC1-201ENST00000264039 PRDM11Q9NQV5 511 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 ZFATQ9P243 1243 aa17.69■□□□□ 0.42
GPC1-201ENST00000264039 NKRFO15226 690 aaKnown RBP eCLIP17.68■□□□□ 0.42
GPC1-201ENST00000264039 KRT15P19012 456 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 RNASELQ05823 741 aaKnown RBP17.68■□□□□ 0.42
GPC1-201ENST00000264039 DIXDC1Q155Q3 683 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 CYP4F22Q6NT55 531 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 SRRM1Q8IYB3 904 aaKnown RBP17.68■□□□□ 0.42
GPC1-201ENST00000264039 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
GPC1-201ENST00000264039 TXNDC9O14530 226 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 PAPOLAP51003 745 aaKnown RBP17.68■□□□□ 0.42
GPC1-201ENST00000264039 NONOQ15233 471 aaKnown RBP eCLIP17.68■□□□□ 0.42
GPC1-201ENST00000264039 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
GPC1-201ENST00000264039 ANKS1AQ92625 1134 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 NAF1Q96HR8 494 aaKnown RBP17.68■□□□□ 0.42
GPC1-201ENST00000264039 DYDC2Q96IM9 177 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 CFAP73A6NFT4 308 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 POTEMA6NI47 508 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 ORC4O43929 436 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 PLCG2P16885 1265 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 METTL13Q8N6R0 699 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 GIMAP8Q8ND71 665 aaPredicted RBP17.68■□□□□ 0.42
GPC1-201ENST00000264039 DUSP9Q99956 384 aaKnown RBP17.68■□□□□ 0.42
GPC1-201ENST00000264039 PNMA3Q9UL41 463 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 BCS1LQ9Y276 419 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 TNRQ92752 1358 aa17.68■□□□□ 0.42
GPC1-201ENST00000264039 OVOS2A0A0G2JMS6 1433 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 WDR19Q8NEZ3 1342 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 ABCC12Q96J65 1359 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 TNIP1Q15025 636 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 MEA1Q16626 185 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 RAB3IPQ96QF0 476 aaPredicted RBP17.67■□□□□ 0.42
GPC1-201ENST00000264039 GDF3Q9NR23 364 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 SCOCQ9UIL1 159 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 STXBP3O00186 592 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 PFDN1O60925 122 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 CCND1P24385 295 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 HP1BP3Q5SSJ5 553 aaPredicted RBP17.67■□□□□ 0.42
GPC1-201ENST00000264039 PNMA1Q8ND90 353 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 ZNF507Q8TCN5 953 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms