RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C YOR342CQ12182 319 aa7.93□□□□□ -1.14
SRP54YPR088C WTM1Q12363 437 aaKnown RBP7.93□□□□□ -1.14
SRP54YPR088C YPR064WQ12492 139 aa7.93□□□□□ -1.14
SRP54YPR088C LAG2Q92325 660 aa7.93□□□□□ -1.14
SRP54YPR088C SUI3P09064 285 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C PTP1P25044 335 aa7.92□□□□□ -1.14
SRP54YPR088C AGP1P25376 633 aa7.92□□□□□ -1.14
SRP54YPR088C CDC3P32457 520 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C SFA1P32771 386 aa7.92□□□□□ -1.14
SRP54YPR088C SKN1P33336 771 aa7.92□□□□□ -1.14
SRP54YPR088C MDJ1P35191 511 aa7.92□□□□□ -1.14
SRP54YPR088C RIB1P38066 345 aa7.92□□□□□ -1.14
SRP54YPR088C STP2P38704 541 aa7.92□□□□□ -1.14
SRP54YPR088C GVP36P40531 326 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C PAC11P40960 533 aa7.92□□□□□ -1.14
SRP54YPR088C YDR239CQ03780 787 aa7.92□□□□□ -1.14
SRP54YPR088C MFB1Q04922 465 aa7.92□□□□□ -1.14
SRP54YPR088C ATG38Q05789 226 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C NDL1Q06568 189 aa7.92□□□□□ -1.14
SRP54YPR088C ARR1Q06596 294 aa7.92□□□□□ -1.14
SRP54YPR088C YDR262WQ12331 272 aa7.92□□□□□ -1.14
SRP54YPR088C RRP12Q12754 1228 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C YOL159C-AQ3E769 90 aa7.92□□□□□ -1.14
SRP54YPR088C SLH1P53327 1967 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C CBS2P14905 389 aa7.92□□□□□ -1.14
SRP54YPR088C CLB4P24871 460 aa7.92□□□□□ -1.14
SRP54YPR088C YCL049CP25577 312 aa7.92□□□□□ -1.14
SRP54YPR088C SSH4P32343 579 aa7.92□□□□□ -1.14
SRP54YPR088C BNA4P38169 460 aa7.92□□□□□ -1.14
SRP54YPR088C MAP2P38174 421 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C TSL1P38427 1098 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C PTC2P39966 464 aaKnown RBP7.92□□□□□ -1.14
SRP54YPR088C ELP2P42935 788 aa7.92□□□□□ -1.14
SRP54YPR088C MSC1Q03104 513 aa7.92□□□□□ -1.14
SRP54YPR088C YDL129WQ07555 291 aa7.92□□□□□ -1.14
SRP54YPR088C FMP27Q06179 2628 aa7.92□□□□□ -1.14
SRP54YPR088C ATR1P13090 542 aa7.91□□□□□ -1.14
SRP54YPR088C SPC34P36131 295 aa7.91□□□□□ -1.14
SRP54YPR088C SCO2P38072 301 aa7.91□□□□□ -1.14
SRP54YPR088C EHT1P38295 451 aa7.91□□□□□ -1.14
SRP54YPR088C SWD1P39706 426 aa7.91□□□□□ -1.14
SRP54YPR088C NEO1P40527 1151 aa7.91□□□□□ -1.14
SRP54YPR088C YPS6P40583 537 aa7.91□□□□□ -1.14
SRP54YPR088C ROG1P53118 685 aa7.91□□□□□ -1.14
SRP54YPR088C FHN1P53279 174 aa7.91□□□□□ -1.14
SRP54YPR088C ESF2P53743 316 aaKnown RBP7.91□□□□□ -1.14
SRP54YPR088C IGO1P53897 168 aa7.91□□□□□ -1.14
SRP54YPR088C OAZ1Q02803 292 aa7.91□□□□□ -1.14
SRP54YPR088C BOP2Q06150 570 aa7.91□□□□□ -1.14
SRP54YPR088C YPR097WQ06839 1073 aa7.91□□□□□ -1.14
SRP54YPR088C TEN1Q07921 160 aa7.91□□□□□ -1.14
SRP54YPR088C YLR036CQ07986 203 aa7.91□□□□□ -1.14
SRP54YPR088C LEU9Q12166 604 aaKnown RBP7.91□□□□□ -1.14
SRP54YPR088C YDL199CQ12407 687 aa7.91□□□□□ -1.14
SRP54YPR088C RPL17AP05740 184 aaKnown RBP7.9□□□□□ -1.14
SRP54YPR088C FBA1P14540 359 aaKnown RBP7.9□□□□□ -1.14
SRP54YPR088C NTG1P31378 399 aa7.9□□□□□ -1.14
SRP54YPR088C APE2P32454 952 aaKnown RBP7.9□□□□□ -1.14
SRP54YPR088C DLD3P39976 496 aaKnown RBP7.9□□□□□ -1.14
SRP54YPR088C LAS21P40367 830 aa7.9□□□□□ -1.14
SRP54YPR088C RPL17BP46990 184 aaKnown RBP7.9□□□□□ -1.14
SRP54YPR088C RRP45Q05636 305 aaKnown RBP7.9□□□□□ -1.14
SRP54YPR088C RRT8Q08219 342 aa7.9□□□□□ -1.14
SRP54YPR088C IRC13Q08630 104 aa7.9□□□□□ -1.14
SRP54YPR088C BMT6Q12291 365 aa7.9□□□□□ -1.14
SRP54YPR088C POL4P25615 582 aa7.89□□□□□ -1.15
SRP54YPR088C PRO1P32264 428 aa7.89□□□□□ -1.15
SRP54YPR088C SRB5P32585 307 aa7.89□□□□□ -1.15
SRP54YPR088C OAR1P35731 278 aa7.89□□□□□ -1.15
SRP54YPR088C DOA1P36037 715 aa7.89□□□□□ -1.15
SRP54YPR088C OMA1P36163 345 aa7.89□□□□□ -1.15
SRP54YPR088C YEL020CP39994 560 aa7.89□□□□□ -1.15
SRP54YPR088C LTP1P40347 161 aa7.89□□□□□ -1.15
SRP54YPR088C FET5P43561 622 aa7.89□□□□□ -1.15
SRP54YPR088C PAC10P48363 199 aa7.89□□□□□ -1.15
SRP54YPR088C ARI1P53111 347 aaKnown RBP7.89□□□□□ -1.15
SRP54YPR088C APC4Q04601 652 aa7.89□□□□□ -1.15
SRP54YPR088C RRN11Q04712 507 aa7.89□□□□□ -1.15
SRP54YPR088C YMR226CQ05016 267 aaKnown RBP7.89□□□□□ -1.15
SRP54YPR088C DBP9Q06218 594 aaKnown RBP7.89□□□□□ -1.15
SRP54YPR088C RTK1Q12100 620 aaPredicted RBP7.89□□□□□ -1.15
SRP54YPR088C MGR1P25573 417 aa7.89□□□□□ -1.15
SRP54YPR088C NRP1P32770 719 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
SRP54YPR088C SUI1P32911 108 aaKnown RBP7.89□□□□□ -1.15
SRP54YPR088C ATG14P38270 344 aa7.89□□□□□ -1.15
SRP54YPR088C YHR177WP38867 453 aa7.89□□□□□ -1.15
SRP54YPR088C THO1P40040 218 aaKnown RBP7.89□□□□□ -1.15
SRP54YPR088C BNA3P47039 444 aaKnown RBP7.89□□□□□ -1.15
SRP54YPR088C GPI8P49018 411 aa7.89□□□□□ -1.15
SRP54YPR088C BNI4P53858 892 aa7.89□□□□□ -1.15
SRP54YPR088C BNA5Q05979 453 aa7.89□□□□□ -1.15
SRP54YPR088C RSA1Q08932 381 aa7.89□□□□□ -1.15
SRP54YPR088C VIK1Q12045 647 aa7.89□□□□□ -1.15
SRP54YPR088C PNO1Q99216 274 aaKnown RBP7.89□□□□□ -1.15
SRP54YPR088C POL2P21951 2222 aaKnown RBP7.88□□□□□ -1.15
SRP54YPR088C GPH1P06738 902 aaKnown RBP7.88□□□□□ -1.15
SRP54YPR088C MER1P16523 270 aa7.88□□□□□ -1.15
SRP54YPR088C PRP2P20095 876 aaPredicted RBP7.88□□□□□ -1.15
SRP54YPR088C MSB1P21339 1137 aaKnown RBP7.88□□□□□ -1.15
SRP54YPR088C GRR1P24814 1151 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms