RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W YGR111WP53265 400 aa3.03□□□□□ -1.92
BUD21YOR078W BSC5P53755 489 aa3.03□□□□□ -1.92
BUD21YOR078W YNL040WP53960 456 aaPredicted RBP3.03□□□□□ -1.92
BUD21YOR078W RPT6Q01939 405 aaKnown RBP3.03□□□□□ -1.92
BUD21YOR078W ACL4Q03771 387 aa3.03□□□□□ -1.92
BUD21YOR078W RPN9Q04062 393 aaKnown RBP3.03□□□□□ -1.92
BUD21YOR078W ARP10Q04549 284 aa3.03□□□□□ -1.92
BUD21YOR078W CRN1Q06440 651 aa3.03□□□□□ -1.92
BUD21YOR078W SGT1Q08446 395 aa3.03□□□□□ -1.92
BUD21YOR078W THP3Q12049 470 aaKnown RBP3.03□□□□□ -1.92
BUD21YOR078W YOS9Q99220 542 aa3.03□□□□□ -1.92
BUD21YOR078W YPT6Q99260 215 aa3.03□□□□□ -1.92
BUD21YOR078W VCX1Q99385 411 aa3.03□□□□□ -1.92
BUD21YOR078W SPO14P36126 1683 aa3.03□□□□□ -1.92
BUD21YOR078W NUP192P47054 1683 aa3.03□□□□□ -1.92
BUD21YOR078W NUP188P52593 1655 aaKnown RBP3.03□□□□□ -1.92
BUD21YOR078W BUD3P25558 1636 aa3.03□□□□□ -1.92
BUD21YOR078W DUR1,2P32528 1835 aaKnown RBP3.03□□□□□ -1.93
BUD21YOR078W TY1B-HO13535 1793 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-DR5P0C2I2 1755 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-DR6P0C2I3 1755 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-LR2P0C2I5 1755 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-LR3P0C2I6 1755 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W TY1B-PR1P0C2I9 1755 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W TY1B-PR2P0C2J0 1756 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-PR3P0C2J1 1755 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W TY1B-JR1P47098 1755 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-ML2Q03434 1755 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W TY1B-ER1Q03612 1755 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-ML1Q04711 1755 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W TY1B-GR2Q12269 1755 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-OLQ12273 1755 aa3.02□□□□□ -1.93
BUD21YOR078W TY1B-PLQ12414 1755 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W ATP6P00854 259 aa3.02□□□□□ -1.93
BUD21YOR078W DSF1P0CX08 502 aa3.02□□□□□ -1.93
BUD21YOR078W YNR073CP0CX09 502 aa3.02□□□□□ -1.93
BUD21YOR078W KSS1P14681 368 aa3.02□□□□□ -1.93
BUD21YOR078W STF2P16965 84 aa3.02□□□□□ -1.93
BUD21YOR078W MRPL8P22353 238 aa3.02□□□□□ -1.93
BUD21YOR078W CMK1P27466 446 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W ACH1P32316 526 aa3.02□□□□□ -1.93
BUD21YOR078W HXT1P32465 570 aa3.02□□□□□ -1.93
BUD21YOR078W CYM1P32898 989 aa3.02□□□□□ -1.93
BUD21YOR078W PMT1P33775 817 aa3.02□□□□□ -1.93
BUD21YOR078W TEF4P36008 412 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W YBL028CP38202 106 aa3.02□□□□□ -1.93
BUD21YOR078W YBR138CP38277 524 aa3.02□□□□□ -1.93
BUD21YOR078W GRE3P38715 327 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
BUD21YOR078W TRM5P38793 499 aa3.02□□□□□ -1.93
BUD21YOR078W ERP2P39704 215 aa3.02□□□□□ -1.93
BUD21YOR078W ELP2P42935 788 aa3.02□□□□□ -1.93
BUD21YOR078W FMP32P43557 207 aa3.02□□□□□ -1.93
BUD21YOR078W IRC6P43615 237 aa3.02□□□□□ -1.93
BUD21YOR078W LSM8P47093 109 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W MLC1P53141 149 aa3.02□□□□□ -1.93
BUD21YOR078W VAC7P53950 1165 aa3.02□□□□□ -1.93
BUD21YOR078W DID2P69771 204 aa3.02□□□□□ -1.93
BUD21YOR078W YMR178WQ03219 274 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W CTL1Q03220 320 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W HER2Q03557 464 aa3.02□□□□□ -1.93
BUD21YOR078W RAD30Q04049 632 aa3.02□□□□□ -1.93
BUD21YOR078W PHM6Q05637 104 aa3.02□□□□□ -1.93
BUD21YOR078W ADE13Q05911 482 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W SPO77Q06134 477 aa3.02□□□□□ -1.93
BUD21YOR078W BCP1Q06338 283 aa3.02□□□□□ -1.93
BUD21YOR078W YPD1Q07688 167 aa3.02□□□□□ -1.93
BUD21YOR078W TRE2Q08693 809 aa3.02□□□□□ -1.93
BUD21YOR078W RAX1Q08760 435 aa3.02□□□□□ -1.93
BUD21YOR078W DAS2Q12084 232 aa3.02□□□□□ -1.93
BUD21YOR078W RTR2Q12378 196 aa3.02□□□□□ -1.93
BUD21YOR078W ERP4Q12450 207 aa3.02□□□□□ -1.93
BUD21YOR078W RRP36Q12481 300 aaPredicted RBP3.02□□□□□ -1.93
BUD21YOR078W RAD61Q99359 647 aa3.02□□□□□ -1.93
BUD21YOR078W UTP10P42945 1769 aaKnown RBP3.02□□□□□ -1.93
BUD21YOR078W MRP13P12686 339 aa3.01□□□□□ -1.93
BUD21YOR078W NCP1P16603 691 aaKnown RBP3.01□□□□□ -1.93
BUD21YOR078W ALG1P16661 449 aa3.01□□□□□ -1.93
BUD21YOR078W CKA2P19454 339 aa3.01□□□□□ -1.93
BUD21YOR078W YSP3P25036 478 aa3.01□□□□□ -1.93
BUD21YOR078W KRR1P25586 316 aaPredicted RBP3.01□□□□□ -1.93
BUD21YOR078W KRE2P27809 442 aa3.01□□□□□ -1.93
BUD21YOR078W ICL1P28240 557 aaPredicted RBP3.01□□□□□ -1.93
BUD21YOR078W PRR1P28708 518 aa3.01□□□□□ -1.93
BUD21YOR078W CLG1P35190 452 aa3.01□□□□□ -1.93
BUD21YOR078W YKL050CP35736 922 aa3.01□□□□□ -1.93
BUD21YOR078W STB6P36085 766 aa3.01□□□□□ -1.93
BUD21YOR078W ANR2P36090 516 aaPredicted RBP3.01□□□□□ -1.93
BUD21YOR078W UTP30P36144 274 aaKnown RBP3.01□□□□□ -1.93
BUD21YOR078W KAP104P38217 918 aaKnown RBP3.01□□□□□ -1.93
BUD21YOR078W MDM31P38880 579 aa3.01□□□□□ -1.93
BUD21YOR078W SEC31P38968 1273 aaKnown RBP3.01□□□□□ -1.93
BUD21YOR078W AIM2P39721 246 aa3.01□□□□□ -1.93
BUD21YOR078W SSO2P39926 295 aa3.01□□□□□ -1.93
BUD21YOR078W PSF2P40359 213 aa3.01□□□□□ -1.93
BUD21YOR078W DPH1P40487 425 aaKnown RBP3.01□□□□□ -1.93
BUD21YOR078W BIR1P47134 954 aa3.01□□□□□ -1.93
BUD21YOR078W MIG2P53035 382 aa3.01□□□□□ -1.93
BUD21YOR078W MND1P53102 219 aa3.01□□□□□ -1.93
BUD21YOR078W CUE3P53137 624 aaKnown RBP3.01□□□□□ -1.93
BUD21YOR078W USE1P53146 245 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms