RNA–Protein interactions for RNA: YOL027C

MDM38, Transcript of Mitochondrial protein, yeast

Gene MDM38, Length 1,722 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDM38	YOL027C	RUP1	Q12242	671 aa		4.09	□□□□□ -1.75
MDM38	YOL027C	VPS15	P22219	1454 aa		4.09	□□□□□ -1.75
MDM38	YOL027C	HIS4	P00815	799 aa	Known RBP	4.09	□□□□□ -1.76
MDM38	YOL027C	UBA1	P22515	1024 aa	Known RBP	4.09	□□□□□ -1.76
MDM38	YOL027C	HSP104	P31539	908 aa	Known RBP	4.09	□□□□□ -1.76
MDM38	YOL027C	SMY1	P32364	656 aa	Known RBP	4.09	□□□□□ -1.76
MDM38	YOL027C	ERG1	P32476	496 aa	Known RBP	4.09	□□□□□ -1.76
MDM38	YOL027C	RRF1	P38771	230 aa		4.09	□□□□□ -1.76
MDM38	YOL027C	VPS52	P39904	641 aa		4.09	□□□□□ -1.76
MDM38	YOL027C	XBP1	P40489	647 aa		4.09	□□□□□ -1.76
MDM38	YOL027C	YPS6	P40583	537 aa		4.09	□□□□□ -1.76
MDM38	YOL027C	SHE4	P51534	789 aa		4.09	□□□□□ -1.76
MDM38	YOL027C	TDA7	P53882	636 aa	Predicted RBP	4.09	□□□□□ -1.76
MDM38	YOL027C	RBA50	Q04418	439 aa		4.09	□□□□□ -1.76
MDM38	YOL027C	SRB8	P25648	1427 aa		4.09	□□□□□ -1.76
MDM38	YOL027C	EXO70	P19658	623 aa		4.08	□□□□□ -1.76
MDM38	YOL027C	SEC62	P21825	274 aa		4.08	□□□□□ -1.76
MDM38	YOL027C	BNA3	P47039	444 aa	Known RBP	4.08	□□□□□ -1.76
MDM38	YOL027C	ROG1	P53118	685 aa		4.08	□□□□□ -1.76
MDM38	YOL027C	GIP3	Q03016	1276 aa		4.08	□□□□□ -1.76
MDM38	YOL027C	YDL009C	Q12210	107 aa		4.08	□□□□□ -1.76
MDM38	YOL027C	YLR419W	Q06698	1435 aa	Known RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	YFL068W	P0CX99	160 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	YLL066W-A	P0CY00	160 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	YLL067W-A	P0CY01	160 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	CTR86	P25355	563 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	PHO91	P27514	894 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	YAL037W	P39728	267 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	MDV1	P47025	714 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	GPI8	P49018	411 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	ASN2	P49090	572 aa	Known RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	YIP5	P53108	310 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	CUE3	P53137	624 aa	Known RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	YGL082W	P53155	381 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	PCP1	P53259	346 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	YNR068C	P53754	272 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	YNL143C	P53908	130 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	PRO2	P54885	456 aa	Known RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	ADA2	Q02336	434 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	MGR3	Q04472	501 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	MRPL51	Q06090	140 aa	Predicted RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	SNT309	Q06091	175 aa	Predicted RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	NSE1	Q07913	336 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	MLH2	Q07980	695 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	SFG1	Q12507	346 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	SRN2	Q99176	213 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	MHP1	P43638	1398 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	ULS1	Q08562	1619 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	NUP159	P40477	1460 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	TY3B-G	Q99315	1547 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	RRP1	P35178	278 aa	Predicted RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	PCF11	P39081	626 aa	Predicted RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	ISC1	P40015	477 aa	Known RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	EFM3	P47163	339 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	PIB2	P53191	635 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	IRC15	Q02733	499 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	RLI1	Q03195	608 aa	Known RBP	4.07	□□□□□ -1.76
MDM38	YOL027C	MRPL1	Q04599	285 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	IPK1	Q06667	281 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	YEH2	Q07950	538 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	NBL1	Q3E7Y6	73 aa		4.07	□□□□□ -1.76
MDM38	YOL027C	MDS3	P53094	1487 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	ILV5	P06168	395 aa	Known RBP	4.06	□□□□□ -1.76
MDM38	YOL027C	NFT1	P0CE68	1218 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	HNM1	P19807	563 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	CRM1	P30822	1084 aa	Known RBP	4.06	□□□□□ -1.76
MDM38	YOL027C	NDI1	P32340	513 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	QDR3	P38227	689 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	YIR014W	P40570	242 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	YIR016W	P40572	265 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	AZF1	P41696	914 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	ELP2	P42935	788 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	YIP1	P53039	248 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	AQR1	P53943	586 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	GPI15	P53961	229 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	UTP6	Q02354	440 aa	Known RBP	4.06	□□□□□ -1.76
MDM38	YOL027C	URH1	Q04179	340 aa		4.06	□□□□□ -1.76
MDM38	YOL027C	SCH9	P11792	824 aa	Known RBP	4.05	□□□□□ -1.76
MDM38	YOL027C	TAL1	P15019	335 aa	Known RBP	4.05	□□□□□ -1.76
MDM38	YOL027C	RAD57	P25301	460 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
MDM38	YOL027C	SIP2	P34164	415 aa	Known RBP	4.05	□□□□□ -1.76
MDM38	YOL027C	YNK1	P36010	153 aa	Known RBP	4.05	□□□□□ -1.76
MDM38	YOL027C	STP2	P38704	541 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	INM1	P38710	295 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	MNL1	P38888	796 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	YIL152W	P40455	235 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	YIL089W	P40500	205 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	STP1	Q00947	519 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	PNG1	Q02890	363 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	SPH1	Q06160	661 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	VPS74	Q06385	345 aa		4.05	□□□□□ -1.76
MDM38	YOL027C	DNF1	P32660	1571 aa		4.04	□□□□□ -1.76
MDM38	YOL027C	IMA3	P0CW40	589 aa		4.04	□□□□□ -1.76
MDM38	YOL027C	IMA4	P0CW41	589 aa		4.04	□□□□□ -1.76
MDM38	YOL027C	GLN3	P18494	730 aa		4.04	□□□□□ -1.76
MDM38	YOL027C	RDS1	P25611	832 aa		4.04	□□□□□ -1.76
MDM38	YOL027C	CYS4	P32582	507 aa	Known RBP	4.04	□□□□□ -1.76
MDM38	YOL027C	YSC83	P32792	385 aa		4.04	□□□□□ -1.76
MDM38	YOL027C	FRE2	P36033	711 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms