RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	TDA5	Q06417	326 aa	Known RBP	5.16	□□□□□ -1.58
RSC30	YHR056C	RAD34	Q06665	692 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	YDL121C	Q07541	149 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	RIO1	Q12196	484 aa	Known RBP	5.16	□□□□□ -1.58
RSC30	YHR056C	TAD3	Q9URQ3	322 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	CBP6	P07253	162 aa	Predicted RBP	5.16	□□□□□ -1.58
RSC30	YHR056C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
RSC30	YHR056C	SSE1	P32589	693 aa	Known RBP	5.16	□□□□□ -1.58
RSC30	YHR056C	UBC6	P33296	250 aa	Predicted RBP	5.16	□□□□□ -1.58
RSC30	YHR056C	SDH3	P33421	198 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	PRS3	P38689	320 aa	Known RBP	5.16	□□□□□ -1.58
RSC30	YHR056C	REC102	Q02721	264 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	VAC14	Q06708	880 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	HNT3	Q08702	217 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	APL4	Q12028	832 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	YPL245W	Q12179	454 aa	Known RBP	5.16	□□□□□ -1.58
RSC30	YHR056C	KCS1	Q12494	1050 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	GAL3	P13045	520 aa		5.15	□□□□□ -1.58
RSC30	YHR056C	COX13	P32799	129 aa		5.15	□□□□□ -1.58
RSC30	YHR056C	BNA4	P38169	460 aa		5.15	□□□□□ -1.58
RSC30	YHR056C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.58	not detected
RSC30	YHR056C	SEN34	P39707	275 aa		5.15	□□□□□ -1.58
RSC30	YHR056C	YJL043W	P47053	257 aa		5.15	□□□□□ -1.58
RSC30	YHR056C	PGU1	P47180	361 aa		5.15	□□□□□ -1.58
RSC30	YHR056C	IBD2	P53892	351 aa		5.15	□□□□□ -1.58
RSC30	YHR056C	MDY2	Q12285	212 aa		5.15	□□□□□ -1.58
RSC30	YHR056C	PRP46	Q12417	451 aa	Predicted RBP	5.15	□□□□□ -1.58
RSC30	YHR056C	RPB2	P08518	1224 aa	Known RBP	5.15	□□□□□ -1.59
RSC30	YHR056C	DAP2	P18962	818 aa		5.15	□□□□□ -1.59
RSC30	YHR056C	AZF1	P41696	914 aa		5.15	□□□□□ -1.59
RSC30	YHR056C	MIC19	P43594	170 aa		5.15	□□□□□ -1.59
RSC30	YHR056C	ARI1	P53111	347 aa	Known RBP	5.15	□□□□□ -1.59
RSC30	YHR056C	TAF11	Q04226	346 aa		5.15	□□□□□ -1.59
RSC30	YHR056C	UBX3	Q12229	455 aa		5.15	□□□□□ -1.59
RSC30	YHR056C	YPR064W	Q12492	139 aa		5.15	□□□□□ -1.59
RSC30	YHR056C	FLP1	P03870	423 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	GCD6	P32501	712 aa	Known RBP	5.14	□□□□□ -1.59
RSC30	YHR056C	LSC1	P53598	329 aa	Known RBP	5.14	□□□□□ -1.59
RSC30	YHR056C	HST2	P53686	357 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	YMR027W	Q04371	470 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	ADE13	Q05911	482 aa	Known RBP	5.14	□□□□□ -1.59
RSC30	YHR056C	CRN1	Q06440	651 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	YLL007C	Q07799	665 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	YHR214C-D	P0CX93	97 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	RPI1	P23250	407 aa	Known RBP	5.14	□□□□□ -1.59
RSC30	YHR056C	YHB1	P39676	399 aa	Known RBP	5.14	□□□□□ -1.59
RSC30	YHR056C	SSP120	P39931	234 aa	Known RBP	5.14	□□□□□ -1.59
RSC30	YHR056C	AVT7	P40501	490 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	TED1	P40533	473 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	EFM5	P53200	248 aa	Known RBP	5.14	□□□□□ -1.59
RSC30	YHR056C	MHT1	Q12525	324 aa		5.14	□□□□□ -1.59
RSC30	YHR056C	ARE1	P25628	610 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	YCR090C	P25654	182 aa	Known RBP	5.13	□□□□□ -1.59
RSC30	YHR056C	RPC37	P36121	282 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	YCR087C-A	P37263	153 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	CIN1	P40987	1014 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	STE24	P47154	453 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	ECL1	P48235	211 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	YNL140C	P53910	189 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	IRC15	Q02733	499 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	YDR249C	Q03787	373 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	RRP15	Q06511	250 aa	Predicted RBP	5.13	□□□□□ -1.59
RSC30	YHR056C	GLT1	Q12680	2145 aa	Known RBP	5.13	□□□□□ -1.59
RSC30	YHR056C	SPS100	P13130	326 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	NCP1	P16603	691 aa	Known RBP	5.13	□□□□□ -1.59
RSC30	YHR056C	YEF1	P32622	495 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	NUP120	P35729	1037 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	YTA6	P40328	754 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	USA1	Q03714	838 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	COS7	Q07788	383 aa		5.13	□□□□□ -1.59
RSC30	YHR056C	SLH1	P53327	1967 aa	Known RBP	5.13	□□□□□ -1.59
RSC30	YHR056C	PRB1	P09232	635 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	GCG1	P32656	232 aa	Known RBP	5.12	□□□□□ -1.59
RSC30	YHR056C	VRP1	P37370	817 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	REV7	P38927	245 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	GCD10	P41814	478 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	SOK2	P53438	785 aa	Predicted RBP	5.12	□□□□□ -1.59
RSC30	YHR056C	TAF12	Q03761	539 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	PSY3	Q12318	242 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	RPL20A	P0CX23	172 aa	Known RBP	5.12	□□□□□ -1.59
RSC30	YHR056C	RPL20B	P0CX24	172 aa	Predicted RBP	5.12	□□□□□ -1.59
RSC30	YHR056C	SGV1	P23293	657 aa	Known RBP	5.12	□□□□□ -1.59
RSC30	YHR056C	CBP4	P37267	147 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	MNN2	P38069	597 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	TDP1	P38319	544 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	TIM10	P87108	93 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	YMR111C	Q04461	462 aa	Predicted RBP	5.12	□□□□□ -1.59
RSC30	YHR056C	ERB1	Q04660	807 aa	Known RBP	5.12	□□□□□ -1.59
RSC30	YHR056C	MRL1	Q06815	381 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	SKS1	Q12505	502 aa		5.12	□□□□□ -1.59
RSC30	YHR056C	YAP1	P19880	650 aa	Known RBP	5.11	□□□□□ -1.59
RSC30	YHR056C	AIM17	P23180	465 aa	Known RBP	5.11	□□□□□ -1.59
RSC30	YHR056C	EMP70	P32802	667 aa		5.11	□□□□□ -1.59
RSC30	YHR056C	CAJ1	P39101	391 aa		5.11	□□□□□ -1.59
RSC30	YHR056C	OAF1	P39720	1047 aa	Predicted RBP	5.11	□□□□□ -1.59
RSC30	YHR056C	YJR039W	P47107	1121 aa		5.11	□□□□□ -1.59
RSC30	YHR056C	AAD10	P47182	288 aa		5.11	□□□□□ -1.59
RSC30	YHR056C	YGR066C	P53242	292 aa		5.11	□□□□□ -1.59
RSC30	YHR056C	GOR1	P53839	350 aa		5.11	□□□□□ -1.59
RSC30	YHR056C	ATP25	Q03153	612 aa		5.11	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms