RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W YPR022CQ12139 1133 aa3.35□□□□□ -1.87
LSM4YER112W RAD61Q99359 647 aa3.35□□□□□ -1.87
LSM4YER112W TEF1P02994 458 aaKnown RBP3.34□□□□□ -1.87
LSM4YER112W SPT15P13393 240 aaKnown RBP3.34□□□□□ -1.87
LSM4YER112W DEG1P31115 442 aaKnown RBP3.34□□□□□ -1.87
LSM4YER112W PAD1P33751 242 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
LSM4YER112W PXA2P34230 853 aa3.34□□□□□ -1.87
LSM4YER112W SOR1P35497 357 aaKnown RBP3.34□□□□□ -1.87
LSM4YER112W APE3P37302 537 aaKnown RBP3.34□□□□□ -1.87
LSM4YER112W RIB5P38145 238 aa3.34□□□□□ -1.87
LSM4YER112W RRN10P38204 145 aa3.34□□□□□ -1.87
LSM4YER112W SLM4P38247 162 aa3.34□□□□□ -1.87
LSM4YER112W SRP72P38688 640 aaKnown RBP3.34□□□□□ -1.87
LSM4YER112W OST1P41543 476 aaKnown RBP3.34□□□□□ -1.87
LSM4YER112W MDG1P53885 366 aa3.34□□□□□ -1.87
LSM4YER112W RSN1Q03516 953 aa3.34□□□□□ -1.87
LSM4YER112W ACL4Q03771 387 aa3.34□□□□□ -1.87
LSM4YER112W PBA1Q05778 276 aa3.34□□□□□ -1.87
LSM4YER112W SOR2Q07786 357 aa3.34□□□□□ -1.87
LSM4YER112W BUG1Q12191 341 aa3.34□□□□□ -1.87
LSM4YER112W YER078W-AQ3E7A2 54 aa3.34□□□□□ -1.87
LSM4YER112W SUP35P05453 685 aaKnown RBP3.33□□□□□ -1.88
LSM4YER112W CHS1P08004 1131 aa3.33□□□□□ -1.88
LSM4YER112W CPR2P23285 205 aa3.33□□□□□ -1.88
LSM4YER112W ARO2P28777 376 aaKnown RBP3.33□□□□□ -1.88
LSM4YER112W SMY1P32364 656 aaKnown RBP3.33□□□□□ -1.88
LSM4YER112W KKQ8P36004 724 aa3.33□□□□□ -1.88
LSM4YER112W RRT2P38332 387 aa3.33□□□□□ -1.88
LSM4YER112W NDT80P38830 627 aa3.33□□□□□ -1.88
LSM4YER112W MTC6P38849 526 aa3.33□□□□□ -1.88
LSM4YER112W PCF11P39081 626 aaPredicted RBP3.33□□□□□ -1.88
LSM4YER112W FAA2P39518 744 aa3.33□□□□□ -1.88
LSM4YER112W YIL067CP40514 678 aa3.33□□□□□ -1.88
LSM4YER112W WWM1P43582 211 aaKnown RBP3.33□□□□□ -1.88
LSM4YER112W GOR1P53839 350 aa3.33□□□□□ -1.88
LSM4YER112W GIP3Q03016 1276 aa3.33□□□□□ -1.88
LSM4YER112W BET5Q03630 159 aa3.33□□□□□ -1.88
LSM4YER112W SKI7Q08491 747 aaPredicted RBP3.33□□□□□ -1.88
LSM4YER112W RSA1Q08932 381 aa3.33□□□□□ -1.88
LSM4YER112W HOM3P10869 527 aa3.32□□□□□ -1.88
LSM4YER112W MDH1P17505 334 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
LSM4YER112W CPR4P25334 318 aa3.32□□□□□ -1.88
LSM4YER112W CTR86P25355 563 aa3.32□□□□□ -1.88
LSM4YER112W GEX1P25596 615 aa3.32□□□□□ -1.88
LSM4YER112W YAL037WP39728 267 aa3.32□□□□□ -1.88
LSM4YER112W ZIM17P42844 174 aa3.32□□□□□ -1.88
LSM4YER112W RPT4P53549 437 aaKnown RBP3.32□□□□□ -1.88
LSM4YER112W GPI15P53961 229 aa3.32□□□□□ -1.88
LSM4YER112W AIM32Q04689 311 aa3.32□□□□□ -1.88
LSM4YER112W MMR1Q06324 491 aa3.32□□□□□ -1.88
LSM4YER112W VPS54Q12071 889 aa3.32□□□□□ -1.88
LSM4YER112W ERV2Q12284 196 aa3.32□□□□□ -1.88
LSM4YER112W ORT1Q12375 292 aa3.32□□□□□ -1.88
LSM4YER112W SMC6Q12749 1114 aa3.32□□□□□ -1.88
LSM4YER112W MTR10Q99189 972 aa3.32□□□□□ -1.88
LSM4YER112W ERV1P27882 189 aa3.31□□□□□ -1.88
LSM4YER112W VMA8P32610 256 aaKnown RBP3.31□□□□□ -1.88
LSM4YER112W PTH1P38876 190 aaKnown RBP3.31□□□□□ -1.88
LSM4YER112W YGR210CP42942 411 aa3.31□□□□□ -1.88
LSM4YER112W NCA3P46955 337 aa3.31□□□□□ -1.88
LSM4YER112W PHO86P46956 311 aa3.31□□□□□ -1.88
LSM4YER112W TCB2P48231 1178 aa3.31□□□□□ -1.88
LSM4YER112W BTN2P53286 410 aa3.31□□□□□ -1.88
LSM4YER112W CIK1Q01649 594 aa3.31□□□□□ -1.88
LSM4YER112W HER2Q03557 464 aa3.31□□□□□ -1.88
LSM4YER112W PPM1Q04081 328 aa3.31□□□□□ -1.88
LSM4YER112W YLR345WQ06137 509 aa3.31□□□□□ -1.88
LSM4YER112W TSR1Q07381 788 aaKnown RBP3.31□□□□□ -1.88
LSM4YER112W SNX3Q08826 162 aaKnown RBP3.31□□□□□ -1.88
LSM4YER112W RMD5Q12508 421 aa3.31□□□□□ -1.88
LSM4YER112W TY1B-AO13527 1196 aaKnown RBP3.3□□□□□ -1.88
LSM4YER112W SLY1P22213 666 aa3.3□□□□□ -1.88
LSM4YER112W MUD1P32605 298 aaKnown RBP3.3□□□□□ -1.88
LSM4YER112W PRM5P40476 318 aa3.3□□□□□ -1.88
LSM4YER112W SPG5P42933 373 aa3.3□□□□□ -1.88
LSM4YER112W TOM22P49334 152 aa3.3□□□□□ -1.88
LSM4YER112W YML6P51998 286 aa3.3□□□□□ -1.88
LSM4YER112W TOF1P53840 1238 aa3.3□□□□□ -1.88
LSM4YER112W OCA2P53949 197 aa3.3□□□□□ -1.88
LSM4YER112W ELP3Q02908 557 aaKnown RBP3.3□□□□□ -1.88
LSM4YER112W SMA2Q04658 369 aa3.3□□□□□ -1.88
LSM4YER112W YOR387CQ08910 206 aa3.3□□□□□ -1.88
LSM4YER112W AEP3Q12089 606 aa3.3□□□□□ -1.88
LSM4YER112W RUP1Q12242 671 aa3.3□□□□□ -1.88
LSM4YER112W ILV5P06168 395 aaKnown RBP3.29□□□□□ -1.88
LSM4YER112W RAD57P25301 460 aa3.29□□□□□ -1.88
LSM4YER112W OLA1P38219 394 aaKnown RBP3.29□□□□□ -1.88
LSM4YER112W ATG34Q12292 412 aa3.29□□□□□ -1.88
LSM4YER112W ADE4P04046 510 aaKnown RBP3.28□□□□□ -1.88
LSM4YER112W NAM9P27929 486 aa3.28□□□□□ -1.88
LSM4YER112W ITR1P30605 584 aa3.28□□□□□ -1.88
LSM4YER112W NIP1P32497 812 aaKnown RBP3.28□□□□□ -1.88
LSM4YER112W LTV1P34078 463 aa3.28□□□□□ -1.88
LSM4YER112W SWH1P35845 1188 aa3.28□□□□□ -1.88
LSM4YER112W YBR056WP38081 501 aa3.28□□□□□ -1.88
LSM4YER112W RRP4P38792 359 aaKnown RBP3.28□□□□□ -1.88
LSM4YER112W VHS2P40463 436 aa3.28□□□□□ -1.88
LSM4YER112W REE1P40893 198 aa3.28□□□□□ -1.88
LSM4YER112W BUD27P43573 796 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
LSM4YER112W AZR1P50080 613 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 153.6 ms