RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W YGR149WP48236 432 aa2.55□□□□□ -2
SSF2YDR312W AVT4P50944 713 aa2.55□□□□□ -2
SSF2YDR312W RQC1Q05468 723 aaKnown RBP2.55□□□□□ -2
SSF2YDR312W APC1P53886 1748 aa2.54□□□□□ -2
SSF2YDR312W REV1P12689 985 aa2.54□□□□□ -2
SSF2YDR312W CLC1P17891 233 aa2.54□□□□□ -2
SSF2YDR312W ATP10P18496 279 aa2.54□□□□□ -2
SSF2YDR312W RAD14P28519 371 aa2.54□□□□□ -2
SSF2YDR312W ISC1P40015 477 aaKnown RBP2.54□□□□□ -2
SSF2YDR312W SPG5P42933 373 aa2.54□□□□□ -2
SSF2YDR312W URB2P47108 1174 aa2.54□□□□□ -2
SSF2YDR312W MSO1P53604 210 aaKnown RBP2.54□□□□□ -2
SSF2YDR312W PIR3Q03180 325 aa2.54□□□□□ -2
SSF2YDR312W DIB1Q06819 143 aaPredicted RBP2.54□□□□□ -2
SSF2YDR312W AHC1Q12433 566 aa2.54□□□□□ -2
SSF2YDR312W RTN2Q12443 393 aa2.54□□□□□ -2
SSF2YDR312W YOL159C-AQ3E769 90 aa2.54□□□□□ -2
SSF2YDR312W YCL021W-AQ96VH3 125 aa2.54□□□□□ -2
SSF2YDR312W IKI3Q06706 1349 aaKnown RBP2.53□□□□□ -2
SSF2YDR312W LEU4P06208 619 aaKnown RBP2.53□□□□□ -2
SSF2YDR312W RHO2P06781 192 aa2.53□□□□□ -2
SSF2YDR312W RED1P14291 827 aa2.53□□□□□ -2
SSF2YDR312W PPH22P23595 377 aa2.53□□□□□ -2
SSF2YDR312W IDH2P28241 369 aaKnown RBP2.53□□□□□ -2
SSF2YDR312W NDI1P32340 513 aa2.53□□□□□ -2
SSF2YDR312W ERG3P32353 365 aa2.53□□□□□ -2
SSF2YDR312W HXT3P32466 567 aaKnown RBP2.53□□□□□ -2
SSF2YDR312W RSM22P36056 628 aa2.53□□□□□ -2
SSF2YDR312W YBP1P38315 674 aa2.53□□□□□ -2
SSF2YDR312W OTU2P38747 307 aaKnown RBP2.53□□□□□ -2
SSF2YDR312W RRT5P43607 289 aa2.53□□□□□ -2
SSF2YDR312W TRS85P46944 698 aa2.53□□□□□ -2
SSF2YDR312W ART5P53244 586 aaKnown RBP2.53□□□□□ -2
SSF2YDR312W HNT3Q08702 217 aa2.53□□□□□ -2
SSF2YDR312W PGA3Q12746 312 aaKnown RBP2.53□□□□□ -2
SSF2YDR312W NUM1Q00402 2748 aa2.53□□□□□ -2
SSF2YDR312W LYS2P07702 1392 aa2.53□□□□□ -2
SSF2YDR312W TOR1P35169 2470 aa2.53□□□□□ -2
SSF2YDR312W CHS1P08004 1131 aa2.52□□□□□ -2.01
SSF2YDR312W CUP1-1P0CX80 61 aa2.52□□□□□ -2.01
SSF2YDR312W CUP1-2P0CX81 61 aa2.52□□□□□ -2.01
SSF2YDR312W PMR1P13586 950 aa2.52□□□□□ -2.01
SSF2YDR312W RPL3P14126 387 aaKnown RBP2.52□□□□□ -2.01
SSF2YDR312W CPR1P14832 162 aaKnown RBP2.52□□□□□ -2.01
SSF2YDR312W YCR100CP25606 316 aa2.52□□□□□ -2.01
SSF2YDR312W YIM1P28625 365 aa2.52□□□□□ -2.01
SSF2YDR312W GLC7P32598 312 aaKnown RBP2.52□□□□□ -2.01
SSF2YDR312W NFU1P32860 256 aa2.52□□□□□ -2.01
SSF2YDR312W CBP4P37267 147 aa2.52□□□□□ -2.01
SSF2YDR312W MKT1P40850 830 aaKnown RBP2.52□□□□□ -2.01
SSF2YDR312W RPA49Q01080 415 aaPredicted RBP2.52□□□□□ -2.01
SSF2YDR312W SYF1Q04048 859 aaPredicted RBP2.52□□□□□ -2.01
SSF2YDR312W SOV1Q04748 898 aa2.52□□□□□ -2.01
SSF2YDR312W YLR287CQ05881 355 aa2.52□□□□□ -2.01
SSF2YDR312W RRG1Q12167 365 aaPredicted RBP2.52□□□□□ -2.01
SSF2YDR312W YER078W-AQ3E7A2 54 aa2.52□□□□□ -2.01
SSF2YDR312W HIP1P06775 603 aa2.51□□□□□ -2.01
SSF2YDR312W MRP4P32902 394 aa2.51□□□□□ -2.01
SSF2YDR312W SAS3P34218 831 aa2.51□□□□□ -2.01
SSF2YDR312W SWH1P35845 1188 aa2.51□□□□□ -2.01
SSF2YDR312W DED81P38707 554 aaKnown RBP2.51□□□□□ -2.01
SSF2YDR312W TFG2P41896 400 aaPredicted RBP2.51□□□□□ -2.01
SSF2YDR312W SHE10P53075 577 aa2.51□□□□□ -2.01
SSF2YDR312W MDG1P53885 366 aa2.51□□□□□ -2.01
SSF2YDR312W SPS4P09937 338 aa2.5□□□□□ -2.01
SSF2YDR312W NIP100P33420 868 aa2.5□□□□□ -2.01
SSF2YDR312W CCT2P39076 527 aaKnown RBP2.5□□□□□ -2.01
SSF2YDR312W YFL040WP43562 540 aa2.5□□□□□ -2.01
SSF2YDR312W YGL242CP53066 181 aa2.5□□□□□ -2.01
SSF2YDR312W RMD9P53140 646 aaKnown RBP2.5□□□□□ -2.01
SSF2YDR312W POP6P53218 158 aa2.5□□□□□ -2.01
SSF2YDR312W PCP1P53259 346 aa2.5□□□□□ -2.01
SSF2YDR312W OGG1P53397 376 aaPredicted RBP2.5□□□□□ -2.01
SSF2YDR312W CAF40P53829 373 aa2.5□□□□□ -2.01
SSF2YDR312W NCS2P53923 493 aaPredicted RBP2.5□□□□□ -2.01
SSF2YDR312W PNG1Q02890 363 aa2.5□□□□□ -2.01
SSF2YDR312W ODC1Q03028 310 aa2.5□□□□□ -2.01
SSF2YDR312W RMT2Q03305 412 aa2.5□□□□□ -2.01
SSF2YDR312W GIR2Q03768 265 aaPredicted RBP2.5□□□□□ -2.01
SSF2YDR312W SIL1Q08199 421 aa2.5□□□□□ -2.01
SSF2YDR312W YAR066WP0CX18 203 aa2.49□□□□□ -2.01
SSF2YDR312W YHR214WP0CX19 203 aa2.49□□□□□ -2.01
SSF2YDR312W PRP21P32524 280 aaPredicted RBP2.49□□□□□ -2.01
SSF2YDR312W GYP6P32806 458 aa2.49□□□□□ -2.01
SSF2YDR312W YCR041WP37265 110 aa2.49□□□□□ -2.01
SSF2YDR312W YIL067CP40514 678 aa2.49□□□□□ -2.01
SSF2YDR312W VTC2P43585 828 aa2.49□□□□□ -2.01
SSF2YDR312W DLD2P46681 530 aaKnown RBP2.49□□□□□ -2.01
SSF2YDR312W YDR387CQ04162 555 aa2.49□□□□□ -2.01
SSF2YDR312W VTA1Q06263 330 aa2.49□□□□□ -2.01
SSF2YDR312W THP3Q12049 470 aaKnown RBP2.49□□□□□ -2.01
SSF2YDR312W FIG2P25653 1609 aa2.49□□□□□ -2.01
SSF2YDR312W RIP1P08067 215 aa2.49□□□□□ -2.01
SSF2YDR312W SAM1P10659 382 aaKnown RBP2.49□□□□□ -2.01
SSF2YDR312W HEM15P16622 393 aa2.49□□□□□ -2.01
SSF2YDR312W FUR1P18562 216 aaKnown RBP2.49□□□□□ -2.01
SSF2YDR312W SAM2P19358 384 aaKnown RBP2.49□□□□□ -2.01
SSF2YDR312W REC107P21651 314 aa2.49□□□□□ -2.01
SSF2YDR312W LDB16P25587 256 aa2.49□□□□□ -2.01
SSF2YDR312W CRM1P30822 1084 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms