RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	KKQ8	P36004	724 aa		3.22	□□□□□ -1.89
ATP16	YDL004W	GPD2	P41911	440 aa	Known RBP	3.22	□□□□□ -1.89
ATP16	YDL004W	YJR011C	P47086	261 aa	Predicted RBP	3.22	□□□□□ -1.89
ATP16	YDL004W	PHB2	P50085	310 aa		3.22	□□□□□ -1.89
ATP16	YDL004W	MTM1	P53320	366 aa		3.22	□□□□□ -1.89
ATP16	YDL004W	CWC25	P53854	179 aa	Known RBP	3.22	□□□□□ -1.89
ATP16	YDL004W	BET5	Q03630	159 aa		3.22	□□□□□ -1.89
ATP16	YDL004W	RRP45	Q05636	305 aa	Known RBP	3.22	□□□□□ -1.89
ATP16	YDL004W	MDM30	Q05930	598 aa		3.22	□□□□□ -1.89
ATP16	YDL004W	PGA3	Q12746	312 aa	Known RBP	3.22	□□□□□ -1.89
ATP16	YDL004W	ILV5	P06168	395 aa	Known RBP	3.21	□□□□□ -1.9
ATP16	YDL004W	NFT1	P0CE68	1218 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	SRV2	P17555	526 aa	Known RBP	3.21	□□□□□ -1.9
ATP16	YDL004W	LSB5	P25369	354 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	RHB1	P25378	209 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	RFC3	P38629	340 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	YLR152C	P54072	576 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	MDM1	Q01846	1127 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	ARX1	Q03862	593 aa	Known RBP	3.21	□□□□□ -1.9
ATP16	YDL004W	YLR287C	Q05881	355 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	SGT1	Q08446	395 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	VAM3	Q12241	283 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	RTP1	Q12751	981 aa		3.21	□□□□□ -1.9
ATP16	YDL004W	HXT1	P32465	570 aa		3.2	□□□□□ -1.9
ATP16	YDL004W	SOR1	P35497	357 aa	Known RBP	3.2	□□□□□ -1.9
ATP16	YDL004W	NTC20	P38302	140 aa	Predicted RBP	3.2	□□□□□ -1.9
ATP16	YDL004W	YGL138C	P53122	345 aa		3.2	□□□□□ -1.9
ATP16	YDL004W	YGL039W	P53183	348 aa	Known RBP	3.2	□□□□□ -1.9
ATP16	YDL004W	PEX25	Q02969	394 aa		3.2	□□□□□ -1.9
ATP16	YDL004W	SOR2	Q07786	357 aa		3.2	□□□□□ -1.9
ATP16	YDL004W	CYC3	P06182	269 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	CDC31	P06704	161 aa	Known RBP	3.19	□□□□□ -1.9
ATP16	YDL004W	SNT1	P25357	1226 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	KRE2	P27809	442 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	HIR2	P32480	875 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	SPR1	P32603	445 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	MRPL10	P36520	322 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	COS5	P47187	383 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	AZR1	P50080	613 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	RSN1	Q03516	953 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	YMR155W	Q03795	547 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	COS7	Q07788	383 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	HSP42	Q12329	375 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	RMD5	Q12508	421 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	YRF1-4	O13559	1382 aa		3.19	□□□□□ -1.9
ATP16	YDL004W	CLC1	P17891	233 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	SPO7	P18410	259 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	CTR86	P25355	563 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	YME2	P32843	850 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	YHR131C	P38835	850 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
ATP16	YDL004W	SSU1	P41930	458 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	MDG1	P53885	366 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	BSC6	Q08280	497 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	YRM1	Q12340	786 aa		3.18	□□□□□ -1.9
ATP16	YDL004W	WTM1	Q12363	437 aa	Known RBP	3.18	□□□□□ -1.9
ATP16	YDL004W	CLN1	P20437	546 aa		3.17	□□□□□ -1.9
ATP16	YDL004W	POP5	P28005	173 aa		3.17	□□□□□ -1.9
ATP16	YDL004W	SHY1	P53266	389 aa		3.17	□□□□□ -1.9
ATP16	YDL004W	SKI7	Q08491	747 aa	Predicted RBP	3.17	□□□□□ -1.9
ATP16	YDL004W	SPO12	P17123	173 aa		3.16	□□□□□ -1.9
ATP16	YDL004W	RAD57	P25301	460 aa		3.16	□□□□□ -1.9
ATP16	YDL004W	SMY1	P32364	656 aa	Known RBP	3.16	□□□□□ -1.9
ATP16	YDL004W	APE3	P37302	537 aa	Known RBP	3.16	□□□□□ -1.9
ATP16	YDL004W	OAZ1	Q02803	292 aa		3.16	□□□□□ -1.9
ATP16	YDL004W	GIP3	Q03016	1276 aa		3.16	□□□□□ -1.9
ATP16	YDL004W	YMR027W	Q04371	470 aa		3.16	□□□□□ -1.9
ATP16	YDL004W	DIS3	Q08162	1001 aa	Known RBP	3.16	□□□□□ -1.9
ATP16	YDL004W	FDH1	Q08911	376 aa		3.16	□□□□□ -1.9
ATP16	YDL004W	RKM1	Q08961	583 aa	Predicted RBP	3.16	□□□□□ -1.9
ATP16	YDL004W	RRG1	Q12167	365 aa	Predicted RBP	3.16	□□□□□ -1.9
ATP16	YDL004W	SFI1	Q12369	946 aa		3.16	□□□□□ -1.9
ATP16	YDL004W	SOD1	P00445	154 aa	Known RBP	3.15	□□□□□ -1.91
ATP16	YDL004W	FUR1	P18562	216 aa	Known RBP	3.15	□□□□□ -1.91
ATP16	YDL004W	PCL1	P24867	279 aa		3.15	□□□□□ -1.91
ATP16	YDL004W	GEX1	P25596	615 aa		3.15	□□□□□ -1.91
ATP16	YDL004W	UTH1	P36135	365 aa		3.15	□□□□□ -1.91
ATP16	YDL004W	BRO1	P48582	844 aa		3.15	□□□□□ -1.91
ATP16	YDL004W	GPI15	P53961	229 aa		3.15	□□□□□ -1.91
ATP16	YDL004W	ROY1	Q04847	553 aa		3.15	□□□□□ -1.91
ATP16	YDL004W	SCEI	P03882	235 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	URA4	P20051	364 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	REC107	P21651	314 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	YCR051W	P25631	222 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	KAR9	P32526	644 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	CSE2	P33308	149 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	BYE1	P36106	594 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	RRP4	P38792	359 aa	Known RBP	3.14	□□□□□ -1.91
ATP16	YDL004W	PCF11	P39081	626 aa	Predicted RBP	3.14	□□□□□ -1.91
ATP16	YDL004W	PHO86	P46956	311 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	YGR250C	P53316	781 aa	Known RBP	3.14	□□□□□ -1.91
ATP16	YDL004W	RHO5	P53879	331 aa	Known RBP	3.14	□□□□□ -1.91
ATP16	YDL004W	SKO1	Q02100	647 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	IRC25	Q07951	179 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	ISN1	Q99312	450 aa		3.14	□□□□□ -1.91
ATP16	YDL004W	TY1B-A	O13527	1196 aa	Known RBP	3.13	□□□□□ -1.91
ATP16	YDL004W	NAM2	P11325	894 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	NPL6	P32832	435 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	JNM1	P36224	373 aa		3.13	□□□□□ -1.91
ATP16	YDL004W	RRN10	P38204	145 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms