RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	APC4	Q04601	652 aa		5.96	□□□□□ -1.46
RSA4	YCR072C	ULA1	Q12059	462 aa		5.96	□□□□□ -1.46
RSA4	YCR072C	MDM32	Q12171	622 aa		5.96	□□□□□ -1.46
RSA4	YCR072C	CAR1	P00812	333 aa	Known RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	PET54	P10834	293 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	ENA1	P13587	1091 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	MAK31	P23059	88 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	SED4	P25365	1065 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	SYP1	P25623	870 aa	Known RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	AAR2	P32357	355 aa	Predicted RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	PRP21	P32524	280 aa	Predicted RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	PEX2	P32800	271 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	SPT10	P35208	640 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	MRPL3	P36516	390 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	MRPL7	P36519	292 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	STV1	P37296	890 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	YBR241C	P38142	488 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	BIG1	P38813	335 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	PZF1	P39933	429 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	PIG2	P40187	538 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	ERG10	P41338	398 aa	Known RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	SMK1	P41808	388 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	BUD13	P46947	266 aa	Predicted RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	RPS12	P48589	143 aa	Known RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	SPT20	P50875	604 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	PMT5	P52867	743 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	RRT6	P53117	311 aa	Predicted RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	CUL3	P53202	744 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	HHO1	P53551	258 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	ARE2	P53629	642 aa	Known RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	ENA2	Q01896	1091 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	ELP3	Q02908	557 aa	Known RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	KAP120	Q02932	1032 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	SNU56	Q03782	492 aa	Known RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	YDR131C	Q03899	556 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	YLR345W	Q06137	509 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	LUC7	Q07508	261 aa	Predicted RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	RCL1	Q08096	367 aa	Predicted RBP	5.95	□□□□□ -1.46
RSA4	YCR072C	ENA5	Q12691	1091 aa		5.95	□□□□□ -1.46
RSA4	YCR072C	ARG3	P05150	338 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	SEC53	P07283	254 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	BAR1	P12630	587 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	CCA1	P21269	546 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	YCL049C	P25577	312 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	HRR25	P29295	494 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	ERG3	P32353	365 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	NDC1	P32500	655 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	YKL077W	P36081	392 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	RRP4	P38792	359 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	YJL206C	P39529	758 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	PCL7	P40186	285 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	PEP8	P40335	379 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	CIN1	P40987	1014 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	COX16	P47081	118 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	BIO3	P50277	480 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	IMA1	P53051	589 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
RSA4	YCR072C	YNL010W	P53981	241 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	YML037C	Q03703	340 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	UFO1	Q04511	668 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	ARO10	Q06408	635 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	GRS2	Q06817	618 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	HAL9	Q12180	1030 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	OSW2	Q12202	724 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	TRM10	Q12400	293 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	FKS3	Q04952	1785 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	ADE8	P04161	214 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	TPK1	P06244	397 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	RAD7	P06779	565 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	CDC23	P16522	626 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	PRP28	P23394	588 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	MIH1	P23748	554 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	RPL24B	P24000	155 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	MNE1	P24720	663 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	DMC1	P25453	334 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	YCR101C	P25607	182 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	URA7	P28274	579 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	RGT1	P32862	1170 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	LST4	P34239	828 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	GPT2	P36148	743 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	BZZ1	P38822	633 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	NPR2	P39923	615 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	RMD6	P39975	231 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	SEC28	P40509	296 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	YIL054W	P40524	105 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	GSM1	P42950	618 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	ASK10	P48361	1146 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	SPC98	P53540	846 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	MTD1	Q02046	320 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	DOT1	Q04089	582 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	VID22	Q05934	901 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	ZEO1	Q08245	113 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
RSA4	YCR072C	GUP2	Q08929	609 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	AEP3	Q12089	606 aa		5.94	□□□□□ -1.46
RSA4	YCR072C	PAR32	Q12515	295 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	RPS21B	Q3E754	87 aa	Known RBP	5.94	□□□□□ -1.46
RSA4	YCR072C	YMR084W	A2P2R3	262 aa		5.93	□□□□□ -1.46
RSA4	YCR072C	GCN4	P03069	281 aa		5.93	□□□□□ -1.46
RSA4	YCR072C	FRS1	P15624	595 aa	Known RBP	5.93	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms