RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	YOL036W	Q08206	761 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	TYW1	Q08960	810 aa	Known RBP	4.09	□□□□□ -1.75
RPG1	YBR079C	YDR056C	Q12025	205 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	RGT2	Q12300	763 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	YCL012C	Q8J0M4	134 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	RPP1B	P10622	106 aa	Known RBP	4.09	□□□□□ -1.75
RPG1	YBR079C	SIR1	P21691	654 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	IDP1	P21954	428 aa	Known RBP	4.09	□□□□□ -1.75
RPG1	YBR079C	PDE1	P22434	369 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	CAT2	P32796	670 aa	Known RBP	4.09	□□□□□ -1.75
RPG1	YBR079C	LHP1	P33399	275 aa	Known RBP	4.09	□□□□□ -1.75
RPG1	YBR079C	TIP20	P33891	701 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	RMA1	P36001	430 aa	Known RBP	4.09	□□□□□ -1.75
RPG1	YBR079C	YKR051W	P36142	418 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	PCL5	P38794	229 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	VMA7	P39111	118 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	YEL073C	P39974	107 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	SIP4	P46954	829 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	VPS25	P47142	202 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	JHD2	P47156	728 aa	Predicted RBP	4.09	□□□□□ -1.75
RPG1	YBR079C	MUP1	P50276	574 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	RTS3	P53289	263 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	COS7	Q07788	383 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	BAG7	Q12128	409 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	YLR046C	Q12253	270 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	PNS1	Q12412	539 aa		4.09	□□□□□ -1.75
RPG1	YBR079C	YAR066W	P0CX18	203 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	YHR214W	P0CX19	203 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	PUP1	P25043	261 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	GEX1	P25596	615 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	NDC1	P32500	655 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	PEP7	P32609	515 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	PPQ1	P32945	549 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	GEX2	P36173	615 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	CBP4	P37267	147 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	RRG9	P40156	214 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	PRE6	P40303	254 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	AZF1	P41696	914 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	EMC4	P53073	190 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	ARO8	P53090	500 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	DBP6	P53734	629 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	AAT1	Q01802	451 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	YLR036C	Q07986	203 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	RAX1	Q08760	435 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	NDD1	Q08887	554 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	YTM1	Q12024	460 aa	Predicted RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	ICL2	Q12031	575 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	MDM32	Q12171	622 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	SIA1	Q12212	622 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	GTT2	Q12390	233 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	PDE2	P06776	526 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	PET9	P18239	318 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	ATG22	P25568	528 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	RSC6	P25632	483 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	ERG9	P29704	444 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	GUT1	P32190	709 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	TSA1	P34760	196 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	HMT1	P38074	348 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	VPS73	P53142	486 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	LSG1	P53145	640 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	YGR266W	P53326	701 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	RPL6A	Q02326	176 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	IRC15	Q02733	499 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	PIR1	Q03178	341 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	YML083C	Q04526	418 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	DCI1	Q08558	271 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	CLP1	Q08685	445 aa	Predicted RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	FMP16	Q12497	93 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	MER1	P16523	270 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	SEN2	P16658	377 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	SYP1	P25623	870 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	PET309	P32522	965 aa	Predicted RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	KAP122	P32767	1081 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	LIP5	P32875	414 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	JEN1	P36035	616 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	YHR020W	P38708	688 aa	Known RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	INM1	P38710	295 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	NNF1	P47149	201 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	RIM21	P48565	533 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	AIM14	P53109	570 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	RPL34A	P87262	121 aa	Predicted RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	YPL071C	Q02864	156 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	YPR114W	Q06107	315 aa		4.08	□□□□□ -1.76
RPG1	YBR079C	RRG7	Q08774	242 aa	Predicted RBP	4.08	□□□□□ -1.76
RPG1	YBR079C	STF2	P16965	84 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	DAL81	P21657	970 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	SIS1	P25294	352 aa	Known RBP	4.07	□□□□□ -1.76
RPG1	YBR079C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RPG1	YBR079C	APT2	P36973	181 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	FMP23	P38231	175 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	MLH1	P38920	769 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	YGR210C	P42942	411 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	IRC18	P47056	224 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	MDE1	P47095	244 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	YJR030C	P47101	745 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	MPC1	P53157	130 aa	Known RBP	4.07	□□□□□ -1.76
RPG1	YBR079C	SYF2	P53277	215 aa	Predicted RBP	4.07	□□□□□ -1.76
RPG1	YBR079C	TPS1	Q00764	495 aa	Known RBP	4.07	□□□□□ -1.76
RPG1	YBR079C	SPO77	Q06134	477 aa		4.07	□□□□□ -1.76
RPG1	YBR079C	VPS74	Q06385	345 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms