RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 DKC1O60832 514 aaKnown RBP eCLIP14.58□□□□□ -0.081e-16■■■■■ 39.7
PHGDH-220ENST00000641570 CUTAO60888 179 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 SNAI1O95863 264 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 MYCNP04198 464 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 UBA1P22314 1058 aaKnown RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 SFNP31947 248 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 UBA7P41226 1012 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 ADCYAP1R1P41586 468 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 CPT1AP50416 773 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 LAMC2Q13753 1193 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 ZRSR1Q15695 479 aaKnown RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 FBXO46Q6PJ61 603 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 CYFIP1Q7L576 1253 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 MIER3Q7Z3K6 550 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 SMAP1Q8IYB5 467 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 CALML4Q96GE6 196 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 AK8Q96MA6 479 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 SPATA33Q96N06 139 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 PYM1Q9BRP8 204 aaKnown RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 AZI2Q9H6S1 392 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 KCNMB3Q9NPA1 279 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 FLRT1Q9NZU1 646 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 LRWD1Q9UFC0 647 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 CCDC39Q9UFE4 941 aa14.58□□□□□ -0.08
PHGDH-220ENST00000641570 DDX49Q9Y6V7 483 aaKnown RBP14.58□□□□□ -0.08
PHGDH-220ENST00000641570 PSAPP07602 524 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 LY6KQ17RY6 165 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 PRAMEF19Q5SWL8 479 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 FAM160B1Q5W0V3 765 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 ZNF746Q6NUN9 644 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-220ENST00000641570 METTL7BQ6UX53 244 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 CCDC73Q6ZRK6 1079 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 ETNPPLQ8TBG4 499 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 SLC5A5Q92911 643 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 TMEM60Q9H2L4 133 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 GDPD2Q9HCC8 539 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 SRPRBQ9Y5M8 271 aaKnown RBP14.57□□□□□ -0.08
PHGDH-220ENST00000641570 KDM3AQ9Y4C1 1321 aa14.57□□□□□ -0.08
PHGDH-220ENST00000641570 SEPT4O43236 478 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.084e-8■■■□□ 17.3
PHGDH-220ENST00000641570 CACNB2Q08289 660 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-220ENST00000641570 DUSP28Q4G0W2 176 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 CELF3Q5SZQ8 465 aaKnown RBP14.56□□□□□ -0.08
PHGDH-220ENST00000641570 TLK2Q86UE8 772 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 CKAP2LQ8IYA6 745 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 RDM1Q8NG50 284 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 NEK9Q8TD19 979 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 SNX29Q8TEQ0 813 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 SH3TC2Q8TF17 1288 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 ATP6V0A1Q93050 837 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 PDGFCQ9NRA1 345 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 DDX41Q9UJV9 622 aaKnown RBP14.56□□□□□ -0.08
PHGDH-220ENST00000641570 RCOR1Q9UKL0 485 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-220ENST00000641570 ELP1O95163 1332 aa14.56□□□□□ -0.08
PHGDH-220ENST00000641570 MGAMO43451 1857 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 WNT7AO00755 349 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-220ENST00000641570 CYBAP13498 195 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 KCNA2P16389 499 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 CCT6AP40227 531 aaKnown RBP14.55□□□□□ -0.08
PHGDH-220ENST00000641570 PDIA5Q14554 519 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 PTPAQ15257 358 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 TAPT1Q6NXT6 567 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 RNF180Q86T96 592 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 GLG1Q92896 1179 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 LENG9Q96B70 501 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 MTMR9Q96QG7 549 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 DISC1Q9NRI5 854 aa14.55□□□□□ -0.08
PHGDH-220ENST00000641570 MORC2Q9Y6X9 1032 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-220ENST00000641570 RBM47A0AV96 593 aaKnown RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 DUSP11O75319 330 aaKnown RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 PRPF40AO75400 957 aaKnown RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 RGS20O76081 388 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 MYCP01106 439 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 C6orf222P0C671 652 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 ZNF865P0CJ78 1059 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 SMPD1P17405 629 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 UBE2HP62256 183 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 ITGB3BPQ13352 177 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 PPP2R5CQ13362 524 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 DGKDQ16760 1214 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 CABP7Q86V35 215 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 SEPT1Q8WYJ6 367 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 MRPS27Q92552 414 aaKnown RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 HAS1Q92839 578 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 CSRNP2Q9H175 543 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 UNC45AQ9H3U1 944 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 XPNPEP3Q9NQH7 507 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 DDX20Q9UHI6 824 aaKnown RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 FBXO2Q9UK22 296 aaPredicted RBP14.54□□□□□ -0.08
PHGDH-220ENST00000641570 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 Q9Y3F1 56 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 PCDHA10Q9Y5I2 948 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 SMCHD1A6NHR9 2005 aa14.54□□□□□ -0.08
PHGDH-220ENST00000641570 CASP8AP2Q9UKL3 1982 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms