RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 STX10O60499 249 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 GYPCP04921 128 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 FXR1P51114 621 aaKnown RBP eCLIP12□□□□□ -0.49
TARDBP-230ENST00000639083 HMGCS2P54868 508 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 HERC4Q5GLZ8 1057 aaPredicted RBP12□□□□□ -0.49
TARDBP-230ENST00000639083 MCF2L2Q86YR7 1114 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 SLC5A5Q92911 643 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 PPP1R13BQ96KQ4 1090 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 PRIMPOLQ96LW4 560 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 TUBGCP2Q9BSJ2 902 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 CTDP1Q9Y5B0 961 aaPredicted RBP12□□□□□ -0.49
TARDBP-230ENST00000639083 STK24Q9Y6E0 443 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 ITIH6Q6UXX5 1313 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 VWA5AO00534 786 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 NKRFO15226 690 aaKnown RBP eCLIP12□□□□□ -0.49
TARDBP-230ENST00000639083 ARHGAP6O43182 974 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 GAS7O60861 476 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 ZBED4O75132 1171 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 SLITRK3O94933 977 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 KRT18P05783 430 aaKnown RBP12□□□□□ -0.49
TARDBP-230ENST00000639083 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
TARDBP-230ENST00000639083 ITGB5P18084 799 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 CTTNQ14247 550 aaKnown RBP12□□□□□ -0.49
TARDBP-230ENST00000639083 FAM26FQ5R3K3 315 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 CCDC65Q8IXS2 484 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 SYT2Q8N9I0 419 aaPredicted RBP12□□□□□ -0.49
TARDBP-230ENST00000639083 IL31RAQ8NI17 732 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 ZNF592Q92610 1267 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 ATG4CQ96DT6 458 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 CNOT6LQ96LI5 555 aaKnown RBP12□□□□□ -0.49
TARDBP-230ENST00000639083 HSD17B14Q9BPX1 270 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 MXRA8Q9BRK3 442 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 ZNF577Q9BSK1 485 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 POLR3CQ9BUI4 534 aaPredicted RBP12□□□□□ -0.49
TARDBP-230ENST00000639083 FGFBP2Q9BYJ0 223 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 ZHX3Q9H4I2 956 aa12□□□□□ -0.49
TARDBP-230ENST00000639083 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 LGALS16A8MUM7 142 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 RNF225M0QZC1 329 aaPredicted RBP11.99□□□□□ -0.49
TARDBP-230ENST00000639083 UQCRHP07919 91 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 PPP2R5CQ13362 524 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 TPH2Q8IWU9 490 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 MYOCDQ8IZQ8 938 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 MB21D1Q8N884 522 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 ZNF507Q8TCN5 953 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 PIGOQ8TEQ8 1089 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 PANX2Q96RD6 677 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 BHMT2Q9H2M3 363 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 PCDHA2Q9Y5H9 948 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■□□□□ 9.2
TARDBP-230ENST00000639083 B4DLN1 442 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 IPO5O00410 1097 aaKnown RBP11.99□□□□□ -0.49
TARDBP-230ENST00000639083 MFAP3LO75121 409 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 MTIF2P46199 727 aaKnown RBP11.99□□□□□ -0.49
TARDBP-230ENST00000639083 RPS6P62753 249 aaKnown RBP11.99□□□□□ -0.49
TARDBP-230ENST00000639083 GIT2Q14161 759 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 SUPT20HL1Q3ZLR7 823 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 FAM114A1Q8IWE2 563 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 SYTL5Q8TDW5 730 aaPredicted RBP11.99□□□□□ -0.49
TARDBP-230ENST00000639083 DYDC2Q96IM9 177 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 TRERF1Q96PN7 1200 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 WDR11Q9BZH6 1224 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 POLD4Q9HCU8 107 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
TARDBP-230ENST00000639083 RPTORQ8N122 1335 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 PITPNM2Q9BZ72 1349 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 ZBTB39O15060 712 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 SETQ01105 290 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-230ENST00000639083 GHRHRQ02643 423 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 UNC45AQ9H3U1 944 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 KCNH7Q9NS40 1196 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 RNF181Q9P0P0 153 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 RABGAP1Q9Y3P9 1069 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 FRMD3A2A2Y4 597 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 C19orf81C9J6K1 198 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 USP2O75604 605 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-230ENST00000639083 TPM1P09493 284 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 HOXA7P31268 230 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-230ENST00000639083 DNM2P50570 870 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 MRPS9P82933 396 aaKnown RBP11.98□□□□□ -0.49
TARDBP-230ENST00000639083 LRRC63Q05C16 580 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 TBC1D8BQ0IIM8 1120 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 MTF1Q14872 753 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 TOGARAM2Q6ZUX3 1019 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 CNGA4Q8IV77 575 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 NELFCDQ8IXH7 590 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 MYRIPQ8NFW9 859 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 PURBQ96QR8 312 aaKnown RBP11.98□□□□□ -0.49
TARDBP-230ENST00000639083 REEP2Q9BRK0 252 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 NOC4LQ9BVI4 516 aaKnown RBP11.98□□□□□ -0.49
TARDBP-230ENST00000639083 PKD2L1Q9P0L9 805 aa11.98□□□□□ -0.49
TARDBP-230ENST00000639083 SSC5DA1L4H1 1573 aa11.97□□□□□ -0.49
TARDBP-230ENST00000639083 SOWAHDA6NJG2 315 aa11.97□□□□□ -0.49
TARDBP-230ENST00000639083 EYA4O95677 639 aa11.97□□□□□ -0.49
TARDBP-230ENST00000639083 TPM2P07951 284 aa11.97□□□□□ -0.49
TARDBP-230ENST00000639083 FDX1P10109 184 aa11.97□□□□□ -0.49
TARDBP-230ENST00000639083 ERCC3P19447 782 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms