RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 TFAMQ00059 246 aaKnown RBP9.85□□□□□ -0.83
CSMD1-218ENST00000635120 DNAJC24Q6P3W2 148 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 MYH3P11055 1940 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 CROCC2H7BZ55 1655 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 CDC42BPBQ9Y5S2 1711 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 LAD1O00515 517 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 CCNYQ8ND76 341 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 DEPDC1BQ8WUY9 529 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 KLHL29Q96CT2 875 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 BTDP43251 543 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 FAM98CQ17RN3 349 aaKnown RBP9.85□□□□□ -0.83
CSMD1-218ENST00000635120 TDRD7Q8NHU6 1098 aaKnown RBP9.85□□□□□ -0.83
CSMD1-218ENST00000635120 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.85□□□□□ -0.83
CSMD1-218ENST00000635120 HNRNPCL2B2RXH8 293 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 HNRNPCL1O60812 293 aaKnown RBP9.85□□□□□ -0.83
CSMD1-218ENST00000635120 ABCB5Q2M3G0 1257 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 RNF217Q8TC41 542 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 H3BRJ5 948 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 CFLARO15519 480 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 PDIA3P30101 505 aaKnown RBP9.85□□□□□ -0.83
CSMD1-218ENST00000635120 MCTP2Q6DN12 878 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 TRIM59Q8IWR1 403 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 ALS2CLQ60I27 953 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 EP400NLQ6ZTU2 488 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 BICRAQ9NZM4 1560 aa9.85□□□□□ -0.83
CSMD1-218ENST00000635120 TCP10L2B9ZVM9 353 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 PPP1R12AO14974 1030 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 TTI1O43156 1089 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 SKIP12755 728 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 EIF4A3P38919 411 aaKnown RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 GRAMD1BQ3KR37 738 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 TMEM259Q4ZIN3 620 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 NPC1L1Q9UHC9 1359 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 RASGRF2O14827 1237 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 ANGPTL8Q6UXH0 198 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 PCGF5Q86SE9 256 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 KCNA6P17658 529 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 GAP43P17677 238 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 FOXD4Q12950 439 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 Q3C1V9 767 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 POLR3EQ9NVU0 708 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 PACSIN2Q9UNF0 486 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 HDLBPQ00341 1268 aaKnown RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 CCHCR1Q8TD31 782 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 FAM149B1Q96BN6 582 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 ZMYND12Q9H0C1 365 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 G3BP2Q9UN86 482 aaKnown RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 PCDHA5Q9Y5H7 936 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 DDX17Q92841 729 aaKnown RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 HSPA8P11142 646 aaKnown RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 DR1Q01658 176 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 RETREG2Q8NC44 543 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 FOXP1Q9H334 677 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 TFDP1Q14186 410 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 DCAF15Q66K64 600 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 SLFN13Q68D06 897 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 CDC26Q8NHZ8 85 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 GSDMAQ96QA5 445 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 SPHKAPQ2M3C7 1700 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 LOC102724159A0A0B4J2E5 919 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 POLE2P56282 527 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 PWP2Q15269 919 aaKnown RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 RASGRP4Q8TDF6 673 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 P2RX5Q93086 422 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 EAF2Q96CJ1 260 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 UBE2TQ9NPD8 197 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-218ENST00000635120 MAN1B1Q9UKM7 699 aa9.84□□□□□ -0.83
CSMD1-218ENST00000635120 ATP2B4P23634 1241 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 KIAA0825Q8IV33 1275 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 LSG1Q9H089 658 aaKnown RBP9.83□□□□□ -0.84
CSMD1-218ENST00000635120 USP44Q9H0E7 712 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 AS3MTQ9HBK9 375 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 STK17AQ9UEE5 414 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 ALDH1B1P30837 517 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 PSMC2P35998 433 aaKnown RBP9.83□□□□□ -0.84
CSMD1-218ENST00000635120 KPNA2P52292 529 aaKnown RBP9.83□□□□□ -0.84
CSMD1-218ENST00000635120 AP1M1Q9BXS5 423 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 SUCLA2Q9P2R7 463 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-218ENST00000635120 CROCCQ5TZA2 2017 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 YEATS2Q9ULM3 1422 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 MAN2A1Q16706 1144 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 FAM186BQ8IYM0 893 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 IRAK4Q9NWZ3 460 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 EIF4A1P60842 406 aaKnown RBP9.83□□□□□ -0.84
CSMD1-218ENST00000635120 ATP6V0A1Q93050 837 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 NHEJ1Q9H9Q4 299 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-218ENST00000635120 CLCN6P51797 869 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 PBKQ96KB5 322 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 PCDHA4Q9UN74 947 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 ZBTB41Q5SVQ8 909 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 SSH3Q8TE77 659 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 EXT2Q93063 718 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 ZNF577Q9BSK1 485 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 SLC13A4Q9UKG4 626 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 KCTD1Q719H9 257 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 NCAPG2Q86XI2 1143 aa9.83□□□□□ -0.84
CSMD1-218ENST00000635120 PGBD1Q96JS3 809 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms