RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ABHD14A-ACY1A0A1B0GW23 586 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 C17orf102A2RUQ5 167 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 SORBS3O60504 671 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 CAND2O75155 1236 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 CXCL10P02778 98 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 LGALS2P05162 132 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 RABGGTBP53611 331 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 COL9A3Q14050 684 aaPredicted RBP11.1□□□□□ -0.63
TARDBP-218ENST00000617172 IKBKEQ14164 716 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 RTN1Q16799 776 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 PPP2R2DQ66LE6 453 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 CNKSR3Q6P9H4 555 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 DHX38Q92620 1227 aaKnown RBP11.1□□□□□ -0.63
TARDBP-218ENST00000617172 ATP6V0A1Q93050 837 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 GPR20Q99678 358 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 PCDHA6Q9UN73 950 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 PCDHA8Q9Y5H6 950 aa11.1□□□□□ -0.63
TARDBP-218ENST00000617172 UNC80Q8N2C7 3258 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 REC8O95072 547 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 SMIM10L2AP0DMW4 78 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 SMIM10L2BP0DMW5 78 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 HOXC8P31273 242 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 MTMR1Q13613 665 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 GPNMBQ14956 572 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 TRIM71Q2Q1W2 868 aaKnown RBP11.09□□□□□ -0.63
TARDBP-218ENST00000617172 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 ZNF618Q5T7W0 954 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 SKAP1Q86WV1 359 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 RAB11FIP4Q86YS3 637 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 HERC6Q8IVU3 1022 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 FBXL16Q8N461 479 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 SEPT1Q8WYJ6 367 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 KCNB2Q92953 911 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 TNPO1Q92973 898 aaKnown RBP11.09□□□□□ -0.63
TARDBP-218ENST00000617172 RNPEPQ9H4A4 650 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 BCAS3Q9H6U6 928 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 RIC8AQ9NPQ8 531 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 BRPF3Q9ULD4 1205 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 UBIAD1Q9Y5Z9 338 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-218ENST00000617172 MYH6P13533 1939 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 NRCAMQ92823 1304 aa11.09□□□□□ -0.63
TARDBP-218ENST00000617172 BAZ2BQ9UIF8 2168 aaKnown RBP11.09□□□□□ -0.63
TARDBP-218ENST00000617172 KLF18A0A0U1RQI7 1052 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 hCG_1642624A0A1W2PR95 340 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 GOLGA8AA7E2F4 631 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 GOLGA8BA8MQT2 603 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 RSPH10B2B2RC85 870 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 EPB41L2O43491 1005 aaKnown RBP11.08□□□□□ -0.64
TARDBP-218ENST00000617172 NBNO60934 754 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 RSPH10BP0C881 870 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 MYOGP15173 224 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 ITGB5P18084 799 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 IGFBP4P22692 258 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 PSMA5P28066 241 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 HSPA4P34932 840 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 THPOP40225 353 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 NAPAP54920 295 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 WDR5P61964 334 aaKnown RBP11.08□□□□□ -0.64
TARDBP-218ENST00000617172 ZNF200P98182 395 aaPredicted RBP11.08□□□□□ -0.64
TARDBP-218ENST00000617172 FUT2Q10981 343 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 WWC2Q6AWC2 1192 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 MCTP2Q6DN12 878 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 SYMPKQ92797 1274 aaKnown RBP11.08□□□□□ -0.64
TARDBP-218ENST00000617172 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 JADE2Q9NQC1 790 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 BARHL2Q9NY43 387 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 EYSQ5T1H1 3165 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 CNTNAP5Q8WYK1 1306 aa11.08□□□□□ -0.64
TARDBP-218ENST00000617172 KIAA1217Q5T5P2 1943 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 SMCO2A6NFE2 343 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 TREHO43280 583 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 TLL1O43897 1013 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 ATP9AO75110 1047 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 LGR5O75473 907 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 CA3P07451 260 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 KCNA2P16389 499 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 POU3F3P20264 500 aaPredicted RBP11.07□□□□□ -0.64
TARDBP-218ENST00000617172 TCF7P36402 384 aaPredicted RBP11.07□□□□□ -0.64
TARDBP-218ENST00000617172 ADCY7P51828 1080 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 AP3B2Q13367 1082 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 UBE2SQ16763 222 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 UTP14CQ5TAP6 766 aaKnown RBP11.07□□□□□ -0.64
TARDBP-218ENST00000617172 TAF2Q6P1X5 1199 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 TRAF7Q6Q0C0 670 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 BLOC1S2Q6QNY1 142 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 CCDC12Q8WUD4 166 aaPredicted RBP11.07□□□□□ -0.64
TARDBP-218ENST00000617172 TCEANC2Q96MN5 208 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 RAD9AQ99638 391 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 MXRA8Q9BRK3 442 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 TSPYL2Q9H2G4 693 aaPredicted RBP11.07□□□□□ -0.64
TARDBP-218ENST00000617172 SMARCAD1Q9H4L7 1026 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 ERAP1Q9NZ08 941 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 NAP1L2Q9ULW6 460 aaPredicted RBP11.07□□□□□ -0.64
TARDBP-218ENST00000617172 PRUNE2Q8WUY3 3088 aa11.07□□□□□ -0.64
TARDBP-218ENST00000617172 GTPBP6O43824 516 aaPredicted RBP11.06□□□□□ -0.64
TARDBP-218ENST00000617172 RPLP2P05387 115 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms