RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 DPF3Q92784 378 aa6.66□□□□□ -1.34
LINC00397-202ENST00000606785 TMEM169Q96HH4 297 aa6.66□□□□□ -1.34
LINC00397-202ENST00000606785 FAXDC2Q96IV6 333 aa6.66□□□□□ -1.34
LINC00397-202ENST00000606785 FCRL2Q96LA5 508 aaPredicted RBP6.66□□□□□ -1.34
LINC00397-202ENST00000606785 METTL22Q9BUU2 404 aaPredicted RBP6.66□□□□□ -1.34
LINC00397-202ENST00000606785 JAM3Q9BX67 310 aa6.66□□□□□ -1.34
LINC00397-202ENST00000606785 SMURF1Q9HCE7 757 aa6.66□□□□□ -1.34
LINC00397-202ENST00000606785 SEMA3GQ9NS98 782 aa6.66□□□□□ -1.34
LINC00397-202ENST00000606785 PNMA8BQ9ULN7 279 aaPredicted RBP6.66□□□□□ -1.34
LINC00397-202ENST00000606785 ANKRD6Q9Y2G4 727 aa6.66□□□□□ -1.34
LINC00397-202ENST00000606785 SPO11Q9Y5K1 396 aa6.66□□□□□ -1.34
LINC00397-202ENST00000606785 EIF3JO75822 258 aaKnown RBP6.65□□□□□ -1.34
LINC00397-202ENST00000606785 KRT37O76014 449 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 RBP3P10745 1247 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 JAM2P57087 298 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 PHC1P78364 1004 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 TEKQ02763 1124 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 FZD5Q13467 585 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 TCIRG1Q13488 830 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 PCBP2Q15366 365 aaKnown RBP eCLIP6.65□□□□□ -1.34
LINC00397-202ENST00000606785 TERF2Q15554 542 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 ZNF174Q15697 407 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 GPR19Q15760 415 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 HHIPL2Q6UWX4 724 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 ZPBP2Q6X784 338 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 CEP68Q76N32 757 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 DGKHQ86XP1 1220 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 SMC5Q8IY18 1101 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 Q8N1Y9 231 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 CPA6Q8N4T0 437 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 TMEM52Q8NDY8 209 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 PLAGL2Q9UPG8 496 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 GIT1Q9Y2X7 761 aa6.65□□□□□ -1.34
LINC00397-202ENST00000606785 WTIPA6NIX2 430 aaPredicted RBP6.64□□□□□ -1.35
LINC00397-202ENST00000606785 AMY2AP04746 511 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 PF4V1P10720 104 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 GNAT1P11488 350 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 KRT15P19012 456 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 AMY2BP19961 511 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 RPL10P27635 214 aaKnown RBP6.64□□□□□ -1.35
LINC00397-202ENST00000606785 IRF9Q00978 393 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 SPIRE1Q08AE8 756 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 HABP4Q5JVS0 413 aaKnown RBP6.64□□□□□ -1.35
LINC00397-202ENST00000606785 GPR158Q5T848 1215 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 HLA-DQA1Q5Y7H0 255 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 PPP4R4Q6NUP7 873 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 PGM2L1Q6PCE3 622 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 SLC4A10Q6U841 1118 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 PRR23CQ6ZRP0 262 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 WAPLQ7Z5K2 1190 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 PNMA8AQ86V59 439 aaPredicted RBP6.64□□□□□ -1.35
LINC00397-202ENST00000606785 RASSF3Q86WH2 238 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 CREG2Q8IUH2 290 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 TPH2Q8IWU9 490 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 KIAA1958Q8N8K9 716 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 KRTAP4-9Q9BYQ8 210 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 MKS1Q9NXB0 559 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 BTG4Q9NY30 223 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 ZNF652Q9Y2D9 606 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 ZNF281Q9Y2X9 895 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 MRFAP1Q9Y605 127 aa6.64□□□□□ -1.35
LINC00397-202ENST00000606785 TRIM75PA6NK02 468 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 ESR1P03372 595 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 SLC9A1P19634 815 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 LSP1P33241 339 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 CD97P48960 835 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 SMAD3P84022 425 aaKnown RBP6.63□□□□□ -1.35
LINC00397-202ENST00000606785 EGR3Q06889 387 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 NFIAQ12857 509 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 LRRC32Q14392 662 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 SMAD2Q15796 467 aaKnown RBP6.63□□□□□ -1.35
LINC00397-202ENST00000606785 CPSF6Q16630 551 aaKnown RBP eCLIP6.63□□□□□ -1.35
LINC00397-202ENST00000606785 IFI16Q16666 785 aaKnown RBP6.63□□□□□ -1.35
LINC00397-202ENST00000606785 MINDY4Q4G0A6 757 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 ARHGAP36Q6ZRI8 547 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 ZNF610Q8N9Z0 462 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 TRMT2BQ96GJ1 504 aaKnown RBP6.63□□□□□ -1.35
LINC00397-202ENST00000606785 ELF4Q99607 663 aaPredicted RBP6.63□□□□□ -1.35
LINC00397-202ENST00000606785 DBNDD2Q9BQY9 259 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 PITPNM2Q9BZ72 1349 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 EPB41L1Q9H4G0 881 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 PCIF1Q9H4Z3 704 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 TOPORSQ9NS56 1045 aaPredicted RBP6.63□□□□□ -1.35
LINC00397-202ENST00000606785 OBP2AQ9NY56 170 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 NOC2LQ9Y3T9 749 aaKnown RBP6.63□□□□□ -1.35
LINC00397-202ENST00000606785 SNX11Q9Y5W9 270 aa6.63□□□□□ -1.35
LINC00397-202ENST00000606785 TCRBV5S4A2TA0A5A2 114 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 VSTM5A8MXK1 200 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 DVL2O14641 736 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 FPR2P25090 351 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 CYP2C19P33261 490 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 CEBPAP49715 358 aaPredicted RBP6.62□□□□□ -1.35
LINC00397-202ENST00000606785 SCAND1P57086 179 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 OS9Q13438 667 aaPredicted RBP6.62□□□□□ -1.35
LINC00397-202ENST00000606785 ODF1Q14990 250 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 SYCP2LQ5T4T6 812 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 ANGEL2Q5VTE6 544 aaKnown RBP6.62□□□□□ -1.35
LINC00397-202ENST00000606785 KSR2Q6VAB6 950 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 OTOP3Q7RTS5 596 aa6.62□□□□□ -1.35
LINC00397-202ENST00000606785 PTRH1Q86Y79 214 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms