RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 DYNC1LI2O43237 492 aaPredicted RBP22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 FARP2O94887 1054 aaPredicted RBP22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 GH1P01241 217 aa22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 RARBP10826 455 aa22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 CALCRLQ16602 461 aa22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 CYFIP1Q7L576 1253 aa22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 TLK2Q86UE8 772 aa22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 OR6J1Q8NGC5 347 aa22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 DEFB118Q96PH6 123 aa22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 TFIP11Q9UBB9 837 aaKnown RBP22.65■■□□□ 1.22
SHKBP1-222ENST00000600320 FRMPD3Q5JV73 1810 aa22.64■■□□□ 1.22
SHKBP1-222ENST00000600320 SYNRGQ9UMZ2 1314 aa22.64■■□□□ 1.22
SHKBP1-222ENST00000600320 MYADML2A6NDP7 307 aa22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 TBX3O15119 743 aa22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 CTAGE5O15320 804 aa22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 PGK1P00558 417 aa22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 DNM1Q05193 864 aaKnown RBP22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 PTGDRQ13258 359 aa22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 NEDD9Q14511 834 aa22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 PTPAQ15257 358 aa22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 DHX37Q8IY37 1157 aaKnown RBP22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 UPF3AQ9H1J1 476 aaKnown RBP22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 Q9Y3F1 56 aa22.64■■□□□ 1.21
SHKBP1-222ENST00000600320 MSCO60682 206 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 ADAMTS4O75173 837 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 PSMD10O75832 226 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 OR52Z1P0C646 297 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 CEBPZQ03701 1054 aaKnown RBP22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 LRCH2Q5VUJ6 765 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 METTL7BQ6UX53 244 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 FAM20AQ96MK3 541 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 SDF4Q9BRK5 362 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 MLXIPQ9HAP2 919 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 XPNPEP3Q9NQH7 507 aa22.63■■□□□ 1.21
SHKBP1-222ENST00000600320 GAS7O60861 476 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 CCNE2O96020 404 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 GJA9P57773 515 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 ATP2C1P98194 919 aaPredicted RBP22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 SP4Q02446 784 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 LAMC2Q13753 1193 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 HSDL1Q3SXM5 330 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 GIMAP8Q8ND71 665 aaPredicted RBP22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 AFG1LQ8WV93 481 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 EMID1Q96A84 441 aaPredicted RBP22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 ZNF396Q96N95 335 aaPredicted RBP22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 RIT2Q99578 217 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 TEKT3Q9BXF9 490 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 JPH1Q9HDC5 661 aaPredicted RBP22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 TBC1D22BQ9NU19 505 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 VAV3Q9UKW4 847 aa22.62■■□□□ 1.21
SHKBP1-222ENST00000600320 MARCH6O60337 910 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 GJB1P08034 283 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 TXKP42681 527 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 NASPP49321 788 aaPredicted RBP22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 NKX3-2P78367 333 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 BEX3Q00994 111 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 B3GNT9Q6UX72 402 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 SPATA33Q96N06 139 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 AP5M1Q9H0R1 490 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 UNC45AQ9H3U1 944 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 SLC9A2Q9UBY0 812 aa22.61■■□□□ 1.21
SHKBP1-222ENST00000600320 BAG4O95429 457 aaKnown RBP22.6■■□□□ 1.21
SHKBP1-222ENST00000600320 IL17AQ16552 155 aa22.6■■□□□ 1.21
SHKBP1-222ENST00000600320 SLFN12Q8IYM2 578 aa22.6■■□□□ 1.21
SHKBP1-222ENST00000600320 KLHDC9Q8NEP7 349 aa22.6■■□□□ 1.21
SHKBP1-222ENST00000600320 U2AF1L4Q8WU68 220 aaKnown RBP22.6■■□□□ 1.21
SHKBP1-222ENST00000600320 GPR20Q99678 358 aa22.6■■□□□ 1.21
SHKBP1-222ENST00000600320 TTC12Q9H892 705 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-222ENST00000600320 POLR3EQ9NVU0 708 aa22.6■■□□□ 1.21
SHKBP1-222ENST00000600320 GSTTP1A0A1W2PQM5 241 aa22.59■■□□□ 1.21
SHKBP1-222ENST00000600320 C6orf222P0C671 652 aaPredicted RBP22.59■■□□□ 1.21
SHKBP1-222ENST00000600320 SPIRE1Q08AE8 756 aa22.59■■□□□ 1.21
SHKBP1-222ENST00000600320 CRISPLD2Q9H0B8 497 aa22.59■■□□□ 1.21
SHKBP1-222ENST00000600320 OGDHLQ9ULD0 1010 aa22.59■■□□□ 1.21
SHKBP1-222ENST00000600320 EML1O00423 815 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 LAD1O00515 517 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 CHMP2AO43633 222 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 SGPL1O95470 568 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 BMP15O95972 392 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 MYCNP04198 464 aaPredicted RBP22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 MMP3P08254 477 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 ACTR2P61160 394 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 LRRC41Q15345 812 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 FSCN1Q16658 493 aaKnown RBP22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 LINC00301Q8NCQ3 95 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 PPTC7Q8NI37 304 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 CEP131Q9UPN4 1083 aa22.58■■□□□ 1.21
SHKBP1-222ENST00000600320 ELP1O95163 1332 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 A6NJR5 290 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 CST5P28325 142 aaPredicted RBP22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 MARCKSP29966 332 aaPredicted RBP22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 PRPHP41219 470 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 TECP42680 631 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 GJA8P48165 433 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 KRT76Q01546 638 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 GRIN1Q05586 938 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 PPP2R5CQ13362 524 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 SLC39A14Q15043 492 aa22.57■■□□□ 1.2
SHKBP1-222ENST00000600320 ATL3Q6DD88 541 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms