RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 AGXT2Q9BYV1 514 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 PCDHA6Q9UN73 950 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 PCDHA8Q9Y5H6 950 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 UBIAD1Q9Y5Z9 338 aa16.83■□□□□ 0.28
FANCA-220ENST00000566409 H3BRB1 525 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 REC8O95072 547 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 KCNA2P16389 499 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 NAPAP54920 295 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 RBL2Q08999 1139 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 TRAF7Q6Q0C0 670 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 RETREG2Q8NC44 543 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 MYLIPQ8WY64 445 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 ZNF576Q9H609 170 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 TUT1Q9H6E5 874 aaKnown RBP16.82■□□□□ 0.28
FANCA-220ENST00000566409 RIC8AQ9NPQ8 531 aa16.82■□□□□ 0.28
FANCA-220ENST00000566409 NAP1L2Q9ULW6 460 aaPredicted RBP16.82■□□□□ 0.28
FANCA-220ENST00000566409 NID2Q14112 1375 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 KAT6AQ92794 2004 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 SPDYE3A6NKU9 549 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 ADAMTS3O15072 1205 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 PFKMP08237 780 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 CKBP12277 381 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 HOXC8P31273 242 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 RFC2P35250 354 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.28
FANCA-220ENST00000566409 RABGGTBP53611 331 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 FGD1P98174 961 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 NLRX1Q86UT6 975 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 TRIM50Q86XT4 487 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 CAGE1Q8TC20 777 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 AFAP1L1Q8TED9 768 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 GPRASP2Q96D09 838 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 PGBD1Q96JS3 809 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 USP26Q9BXU7 913 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 BARHL2Q9NY43 387 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 YBX2Q9Y2T7 364 aaKnown RBP16.81■□□□□ 0.28
FANCA-220ENST00000566409 SLC4A7Q9Y6M7 1214 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 VCANP13611 3396 aa16.81■□□□□ 0.28
FANCA-220ENST00000566409 NOP56O00567 594 aaKnown RBP16.8■□□□□ 0.28
FANCA-220ENST00000566409 SELPP16109 830 aa16.8■□□□□ 0.28
FANCA-220ENST00000566409 PTK7Q13308 1070 aa16.8■□□□□ 0.28
FANCA-220ENST00000566409 TCTN1Q2MV58 587 aa16.8■□□□□ 0.28
FANCA-220ENST00000566409 PPP1R18Q6NYC8 613 aa16.8■□□□□ 0.28
FANCA-220ENST00000566409 SLC17A8Q8NDX2 589 aa16.8■□□□□ 0.28
FANCA-220ENST00000566409 CYP2W1Q8TAV3 490 aa16.8■□□□□ 0.28
FANCA-220ENST00000566409 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
FANCA-220ENST00000566409 RNPEPQ9H4A4 650 aa16.8■□□□□ 0.28
FANCA-220ENST00000566409 TMEM260Q9NX78 707 aa16.8■□□□□ 0.28
FANCA-220ENST00000566409 GSTTP1A0A1W2PQM5 241 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 SMCO2A6NFE2 343 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 ZBBXA8MT70 800 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
FANCA-220ENST00000566409 NBNO60934 754 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 SMIM10L2AP0DMW4 78 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 SMIM10L2BP0DMW5 78 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 MYOGP15173 224 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 CLK2P49760 499 aaKnown RBP16.79■□□□□ 0.28
FANCA-220ENST00000566409 EVCP57679 992 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 SP4Q02446 784 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 MBTPS1Q14703 1052 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 NTRK3Q16288 839 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 PKN1Q16512 942 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 PFKFB3Q16875 520 aaPredicted RBP16.79■□□□□ 0.28
FANCA-220ENST00000566409 LRRC8DQ7L1W4 858 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 SERINC5Q86VE9 423 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 PKD2L1Q9P0L9 805 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 REV3LO60673 3130 aa16.79■□□□□ 0.28
FANCA-220ENST00000566409 hCG_1984214I3L0E3 225 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 PPFIA3O75145 1194 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 CXCL10P02778 98 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 PSMA5P28066 241 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 ADCY7P51828 1080 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 MTMR1Q13613 665 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 TOB2Q14106 344 aaPredicted RBP16.78■□□□□ 0.28
FANCA-220ENST00000566409 ZNF618Q5T7W0 954 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 UTP14CQ5TAP6 766 aaKnown RBP16.78■□□□□ 0.28
FANCA-220ENST00000566409 RUFY3Q7L099 469 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 ZNF713Q8N859 430 aaPredicted RBP16.78■□□□□ 0.28
FANCA-220ENST00000566409 CDHR1Q96JP9 859 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 FTOQ9C0B1 505 aaKnown RBP eCLIP16.78■□□□□ 0.28
FANCA-220ENST00000566409 NKX2-4Q9H2Z4 354 aa16.78■□□□□ 0.28
FANCA-220ENST00000566409 SPTBN5Q9NRC6 3674 aaKnown RBP16.77■□□□□ 0.28
FANCA-220ENST00000566409 CCDC196A0A1B0GTZ2 297 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 C17orf102A2RUQ5 167 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 TREHO43280 583 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.28
FANCA-220ENST00000566409 SCG2P13521 617 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
FANCA-220ENST00000566409 PDIA3P30101 505 aaKnown RBP16.77■□□□□ 0.28
FANCA-220ENST00000566409 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.28
FANCA-220ENST00000566409 ADAM17P78536 824 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 RAB30Q15771 203 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 GIMAP8Q8ND71 665 aaPredicted RBP16.77■□□□□ 0.28
FANCA-220ENST00000566409 ATP6V0A1Q93050 837 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 PHKBQ93100 1093 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms