RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 IL16Q14005 1332 aa6.44□□□□□ -1.38
HERC1-213ENST00000561359 MAP1BP46821 2468 aaKnown RBP6.43□□□□□ -1.38
HERC1-213ENST00000561359 ZNFX1Q9P2E3 1918 aaKnown RBP6.43□□□□□ -1.38
HERC1-213ENST00000561359 DNAJC25-GNG10A0A024R161 153 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 PTGS1P23219 599 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 GPC1P35052 558 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 LTBRP36941 435 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 MCAMP43121 646 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 SMAD4Q13485 552 aaKnown RBP6.43□□□□□ -1.38
HERC1-213ENST00000561359 PUM1Q14671 1186 aaKnown RBP eCLIP6.43□□□□□ -1.38
HERC1-213ENST00000561359 COL19A1Q14993 1142 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 ST3GAL2Q16842 350 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 MCTP2Q6DN12 878 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 SNRNP48Q6IEG0 339 aaKnown RBP6.43□□□□□ -1.38
HERC1-213ENST00000561359 CCDC144CPQ8IYA2 1237 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 ANKRD35Q8N283 1001 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 ZSCAN1Q8NBB4 408 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 TEX13BQ9BXU2 312 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 SH2D4AQ9H788 454 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 VCPKMTQ9H867 229 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
HERC1-213ENST00000561359 PPP1R9AQ9ULJ8 1098 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 ADAMTS5Q9UNA0 930 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 GNEQ9Y223 722 aaKnown RBP6.43□□□□□ -1.38
HERC1-213ENST00000561359 NOD1Q9Y239 953 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 COG6Q9Y2V7 657 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 FRYLO94915 3013 aa6.43□□□□□ -1.38
HERC1-213ENST00000561359 CACNA1FO60840 1977 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 TRAK2O60296 914 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 POLR3DP05423 398 aaPredicted RBP6.42□□□□□ -1.38
HERC1-213ENST00000561359 CYP7A1P22680 504 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 ARID4AP29374 1257 aaPredicted RBP6.42□□□□□ -1.38
HERC1-213ENST00000561359 PLCD1P51178 756 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 ICA1Q05084 483 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 DLX2Q07687 328 aaPredicted RBP6.42□□□□□ -1.38
HERC1-213ENST00000561359 TFCP2Q12800 502 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 USP4Q13107 963 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 CLN3Q13286 438 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 GPM6BQ13491 265 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 EPC2Q52LR7 807 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 TMEM179Q6ZVK1 233 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 SV2AQ7L0J3 742 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 CLEC10AQ8IUN9 316 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 KIAA2013Q8IYS2 634 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 VWA5B2Q8N398 1253 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 MIGA1Q8NAN2 632 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 KCNG4Q8TDN1 519 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 ASIC4Q96FT7 647 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 CD207Q9UJ71 328 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 RIPK3Q9Y572 518 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 INSL6Q9Y581 213 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 CTDP1Q9Y5B0 961 aaPredicted RBP6.42□□□□□ -1.38
HERC1-213ENST00000561359 PLXNA3P51805 1871 aa6.42□□□□□ -1.38
HERC1-213ENST00000561359 FAM208BQ5VWN6 2430 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 TET1Q8NFU7 2136 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 ABHD14A-ACY1A0A1B0GW23 586 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 H3BNC9 293 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 PDGFBP01127 241 aaPredicted RBP6.41□□□□□ -1.38
HERC1-213ENST00000561359 MYL3P08590 195 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 UQCRFS1P1P0C7P4 283 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 UBTFL1P0CB47 393 aaPredicted RBP6.41□□□□□ -1.38
HERC1-213ENST00000561359 SOX11P35716 441 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 CHMP4BP1P59074 171 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 POU4F2Q12837 409 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 LRRFIP1Q32MZ4 808 aaKnown RBP6.41□□□□□ -1.38
HERC1-213ENST00000561359 TSGA10IPQ3SY00 556 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 CNKSR3Q6P9H4 555 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 RIPOR1Q6ZS17 1223 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 CPXCR1Q8N123 301 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 REPS2Q8NFH8 660 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 PPP1R13LQ8WUF5 828 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 FGD4Q96M96 766 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 SAMD11Q96NU1 681 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 KATNBL1Q9H079 304 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 IGFLR1Q9H665 355 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 RALYQ9UKM9 306 aaKnown RBP6.41□□□□□ -1.38
HERC1-213ENST00000561359 TMX2Q9Y320 296 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 SCN5AQ14524 2016 aa6.41□□□□□ -1.38
HERC1-213ENST00000561359 ASB14A6NK59 587 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 LOC730098B7Z3J9 87 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 E9PSI1 815 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 EFCAB14O75071 495 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 TBX10O75333 385 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 CSPG5O95196 566 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 NDUFV1P49821 464 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 CNTN2Q02246 1040 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 HYAL1Q12794 435 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 IKBKEQ14164 716 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 TMEM132AQ24JP5 1023 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 FAM83BQ5T0W9 1011 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 IQSEC1Q6DN90 963 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 EEPD1Q7L9B9 569 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 CERS3Q8IU89 383 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 SIAH1Q8IUQ4 282 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 TMEM192Q8IY95 271 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 MYOCDQ8IZQ8 938 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 GPR161Q8N6U8 529 aaKnown RBP6.4□□□□□ -1.38
HERC1-213ENST00000561359 NANOS1Q8WY41 292 aaKnown RBP6.4□□□□□ -1.38
HERC1-213ENST00000561359 RPGRIP1Q96KN7 1286 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 RIPOR3Q96MK2 946 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms