RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 GPR19Q15760 415 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 CD300LDQ6UXZ3 194 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 FAM129CQ86XR2 697 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 SMARCC2Q8TAQ2 1214 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 CLUHP3Q96NS8 147 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 PCDH18Q9HCL0 1135 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 TBX22Q9Y458 520 aa6.96□□□□□ -1.3
USP8-218ENST00000561330 RFPL3O75679 317 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 C8BP07358 591 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 CYP2C8P10632 490 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 PDE6AP16499 860 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 NKX3-2P78367 333 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 CRY1Q16526 586 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 ARHGAP36Q6ZRI8 547 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 EP400NLQ6ZTU2 488 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 CILP2Q8IUL8 1156 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 TMEM151BQ8IW70 566 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 RBM12BQ8IXT5 1001 aaKnown RBP6.95□□□□□ -1.3
USP8-218ENST00000561330 LRRC56Q8IYG6 542 aaPredicted RBP6.95□□□□□ -1.3
USP8-218ENST00000561330 ZSCAN18Q8TBC5 510 aaPredicted RBP6.95□□□□□ -1.3
USP8-218ENST00000561330 TOE1Q96GM8 510 aaKnown RBP6.95□□□□□ -1.3
USP8-218ENST00000561330 IRF2BPLQ9H1B7 796 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 EPB41L4AQ9HCS5 686 aaPredicted RBP6.95□□□□□ -1.3
USP8-218ENST00000561330 DTLQ9NZJ0 730 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 TMA7Q9Y2S6 64 aaKnown RBP6.95□□□□□ -1.3
USP8-218ENST00000561330 CD2APQ9Y5K6 639 aa6.95□□□□□ -1.3
USP8-218ENST00000561330 TLDC2A0PJX2 215 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 B4E1Z4 1266 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 KRT15P19012 456 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 CFPP27918 469 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 PABPC4Q13310 644 aaKnown RBP eCLIP6.94□□□□□ -1.3
USP8-218ENST00000561330 GIMAP6Q6P9H5 292 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 OSTM1Q86WC4 334 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 FAM26EQ8N5C1 309 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 TTLL11Q8NHH1 800 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 PWWP2AQ96N64 755 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 CELF4Q9BZC1 486 aaKnown RBP6.94□□□□□ -1.3
USP8-218ENST00000561330 CBLCQ9ULV8 474 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 COQ6Q9Y2Z9 468 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 PMF1-BGLAPU3KQ54 211 aa6.94□□□□□ -1.3
USP8-218ENST00000561330 TCRBV5S4A2TA0A5A2 114 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 OPA1O60313 960 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 NPTXRO95502 500 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 ASLP04424 464 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 CKMP06732 381 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
USP8-218ENST00000561330 GRIN1Q05586 938 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 TKFCQ3LXA3 575 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.93□□□□□ -1.3
USP8-218ENST00000561330 DDX53Q86TM3 631 aaKnown RBP6.93□□□□□ -1.3
USP8-218ENST00000561330 PTRH1Q86Y79 214 aaKnown RBP6.93□□□□□ -1.3
USP8-218ENST00000561330 NLGN4XQ8N0W4 816 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 CLEC4DQ8WXI8 215 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 DACT3Q96B18 629 aaPredicted RBP6.93□□□□□ -1.3
USP8-218ENST00000561330 CD244Q9BZW8 370 aa6.93□□□□□ -1.3
USP8-218ENST00000561330 ENPP3O14638 875 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 DNAJC8O75937 253 aaPredicted RBP6.92□□□□□ -1.3
USP8-218ENST00000561330 LRG1P02750 347 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 LTFP02788 710 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 KCNA6P17658 529 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 IGFALSP35858 605 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 EPHA5P54756 1037 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 JAM2P57087 298 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 LACTBP83111 547 aaPredicted RBP6.92□□□□□ -1.3
USP8-218ENST00000561330 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 TCERG1LQ5VWI1 586 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 TEPPQ6URK8 271 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 CISD2Q8N5K1 135 aaKnown RBP6.92□□□□□ -1.3
USP8-218ENST00000561330 IGSF22Q8N9C0 903 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 SH3RF2Q8TEC5 729 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 FEZ1Q99689 392 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 PDGFDQ9GZP0 370 aaPredicted RBP6.92□□□□□ -1.3
USP8-218ENST00000561330 MAGEC2Q9UBF1 373 aaPredicted RBP6.92□□□□□ -1.3
USP8-218ENST00000561330 SRPK3Q9UPE1 567 aa6.92□□□□□ -1.3
USP8-218ENST00000561330 TNPO3Q9Y5L0 923 aaKnown RBP6.92□□□□□ -1.3
USP8-218ENST00000561330 ZNF561-AS1K7EIQ3 104 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 AMY2AP04746 511 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 AMY2BP19961 511 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 SDSP20132 328 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 FLT3P36888 993 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 PAN2Q504Q3 1202 aaKnown RBP6.91□□□□□ -1.3
USP8-218ENST00000561330 ABHD17CQ6PCB6 329 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 C1QL4Q86Z23 238 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 FNIP1Q8TF40 1166 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 NOX5Q96PH1 765 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 GORASP1Q9BQQ3 440 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 TELO2Q9Y4R8 837 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 ATP23Q9Y6H3 246 aa6.91□□□□□ -1.3
USP8-218ENST00000561330 MAN2B1O00754 1011 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
USP8-218ENST00000561330 HTRA3P83110 453 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 ZNF460Q14592 562 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 FIGNQ5HY92 759 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 ZCCHC8Q6NZY4 707 aaKnown RBP6.9□□□□□ -1.3
USP8-218ENST00000561330 KIAA0907Q7Z7F0 614 aaPredicted RBP6.9□□□□□ -1.3
USP8-218ENST00000561330 NINJ1Q92982 152 aa6.9□□□□□ -1.3
USP8-218ENST00000561330 ZBTB8AQ96BR9 441 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms