RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 FAM86C1Q9NVL1 165 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 MINPP1Q9UNW1 487 aa5.43□□□□□ -1.54
VTI1B-203ENST00000554636 RRP7AQ9Y3A4 280 aaKnown RBP5.43□□□□□ -1.54
VTI1B-203ENST00000554636 ARFGEF2Q9Y6D5 1785 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 FARP2O94887 1054 aaPredicted RBP5.42□□□□□ -1.54
VTI1B-203ENST00000554636 NME1P15531 152 aaKnown RBP5.42□□□□□ -1.54
VTI1B-203ENST00000554636 RPL10P27635 214 aaKnown RBP5.42□□□□□ -1.54
VTI1B-203ENST00000554636 RIPK4P57078 832 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 LMOD3Q0VAK6 560 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 WDR43Q15061 677 aaKnown RBP eCLIP5.42□□□□□ -1.54
VTI1B-203ENST00000554636 NBPF12Q5TAG4 269 aaPredicted RBP5.42□□□□□ -1.54
VTI1B-203ENST00000554636 CDCP2Q5VXM1 449 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 PRR5LQ6MZQ0 368 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 CCDC81Q6ZN84 652 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 LRP10Q7Z4F1 713 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 TMEM192Q8IY95 271 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 RUNDC1Q96C34 613 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 VWCEQ96DN2 955 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 MRRFQ96E11 262 aaKnown RBP5.42□□□□□ -1.54
VTI1B-203ENST00000554636 SLC9A7Q96T83 725 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 FOXP3Q9BZS1 431 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 NSUN3Q9H649 340 aaKnown RBP5.42□□□□□ -1.54
VTI1B-203ENST00000554636 TSPYL4Q9UJ04 414 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 PPT2Q9UMR5 302 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 TNRC6CQ9HCJ0 1690 aaKnown RBP5.42□□□□□ -1.54
VTI1B-203ENST00000554636 SBF1O95248 1867 aa5.42□□□□□ -1.54
VTI1B-203ENST00000554636 NUP98P52948 1817 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 CACNA1SQ13698 1873 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 SSU72P8A0A1W2PR75 194 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 PRAMEF1O95521 474 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 ZGLP1P0C6A0 271 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 GALK1P51570 392 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 PKN1Q16512 942 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 NBPF9Q3BBW0 867 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 CCDC184Q52MB2 194 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 TIGD5Q53EQ6 642 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 DALRD3Q5D0E6 543 aaKnown RBP5.41□□□□□ -1.54
VTI1B-203ENST00000554636 TDRD10Q5VZ19 366 aaKnown RBP5.41□□□□□ -1.54
VTI1B-203ENST00000554636 TTLL7Q6ZT98 887 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 HDAC8Q9BY41 377 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 PRDM14Q9GZV8 571 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 RNF32Q9H0A6 362 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 BABAM1Q9NWV8 329 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 DDX41Q9UJV9 622 aaKnown RBP5.41□□□□□ -1.54
VTI1B-203ENST00000554636 FBXL21Q9UKT6 434 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 FER1L6Q2WGJ9 1857 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 ABCC12Q96J65 1359 aa5.41□□□□□ -1.54
VTI1B-203ENST00000554636 ANKRD36CQ5JPF3 1778 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 SLX4Q8IY92 1834 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 MEIS3P2A8K0S8 358 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 CHL1O00533 1208 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 SCAMP3O14828 347 aaKnown RBP5.4□□□□□ -1.54
VTI1B-203ENST00000554636 HPXP02790 462 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 ACRP10323 421 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 PRELPP51888 382 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 TEKQ02763 1124 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 RAD51AP2Q09MP3 1159 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 HLFQ16534 295 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 KRT24Q2M2I5 525 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 LRRFIP1Q32MZ4 808 aaKnown RBP5.4□□□□□ -1.54
VTI1B-203ENST00000554636 CLEC4GQ6UXB4 293 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 C2CD5Q86YS7 1000 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 CNBD1Q8NA66 436 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 TCTN2Q96GX1 697 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 SLC38A3Q99624 504 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 GFOD1Q9NXC2 390 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 FAM53CQ9NYF3 392 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 EBF1Q9UH73 591 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 GPR160Q9UJ42 338 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 ZMYM5Q9UJ78 669 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 ZNRF3Q9ULT6 936 aa5.4□□□□□ -1.54
VTI1B-203ENST00000554636 MAP3K15Q6ZN16 1313 aa5.4□□□□□ -1.55
VTI1B-203ENST00000554636 IBTKQ9P2D0 1353 aaPredicted RBP5.4□□□□□ -1.55
VTI1B-203ENST00000554636 TIAM2Q8IVF5 1701 aa5.4□□□□□ -1.55
VTI1B-203ENST00000554636 UNCXA6NJT0 531 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 ERVV-1B6SEH8 477 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 TNFRSF10CO14798 259 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 USP2O75604 605 aaPredicted RBP5.39□□□□□ -1.55
VTI1B-203ENST00000554636 SYPP08247 313 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 ZNF853P0CG23 659 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 MYL6BP14649 208 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 PAK2Q13177 524 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 PROSER3Q2NL68 480 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 ZPBP2Q6X784 338 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 RUFY4Q6ZNE9 571 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 NPM2Q86SE8 214 aaKnown RBP5.39□□□□□ -1.55
VTI1B-203ENST00000554636 SIRT2Q8IXJ6 389 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 CCDC144CPQ8IYA2 1237 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 PDZD8Q8NEN9 1154 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 SYTL5Q8TDW5 730 aaPredicted RBP5.39□□□□□ -1.55
VTI1B-203ENST00000554636 DHX38Q92620 1227 aaKnown RBP5.39□□□□□ -1.55
VTI1B-203ENST00000554636 BRIP1Q9BX63 1249 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 TCFL5Q9UL49 500 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 NIP7Q9Y221 180 aaKnown RBP eCLIP5.39□□□□□ -1.55
VTI1B-203ENST00000554636 ZNF652Q9Y2D9 606 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 PCDHB12Q9Y5F1 795 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 UBN2Q6ZU65 1347 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 RIC1Q4ADV7 1423 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 SNED1Q8TER0 1413 aa5.39□□□□□ -1.55
VTI1B-203ENST00000554636 CCDC88AQ3V6T2 1871 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms