RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 WNT8BQ93098 351 aa23.63■■□□□ 1.37
HIF1A-206ENST00000553999 GUCD1Q96NT3 240 aa23.63■■□□□ 1.37
HIF1A-206ENST00000553999 GPR20Q99678 358 aa23.63■■□□□ 1.37
HIF1A-206ENST00000553999 FTOQ9C0B1 505 aaKnown RBP eCLIP23.63■■□□□ 1.37
HIF1A-206ENST00000553999 EHMT1Q9H9B1 1298 aa23.63■■□□□ 1.37
HIF1A-206ENST00000553999 ZSWIM6Q9HCJ5 1215 aa23.63■■□□□ 1.37
HIF1A-206ENST00000553999 HAS3O00219 553 aa23.62■■□□□ 1.37
HIF1A-206ENST00000553999 PDIA3P30101 505 aaKnown RBP23.62■■□□□ 1.37
HIF1A-206ENST00000553999 RCAN1P53805 252 aa23.62■■□□□ 1.37
HIF1A-206ENST00000553999 AKAP17AQ02040 695 aaKnown RBP23.62■■□□□ 1.37
HIF1A-206ENST00000553999 BFSP2Q13515 415 aa23.62■■□□□ 1.37
HIF1A-206ENST00000553999 PFKFB3Q16875 520 aaPredicted RBP23.62■■□□□ 1.37
HIF1A-206ENST00000553999 XRRA1Q6P2D8 792 aa23.62■■□□□ 1.37
HIF1A-206ENST00000553999 CYP2W1Q8TAV3 490 aa23.62■■□□□ 1.37
HIF1A-206ENST00000553999 VWCEQ96DN2 955 aa23.62■■□□□ 1.37
HIF1A-206ENST00000553999 TTYH1Q9H313 450 aaPredicted RBP23.62■■□□□ 1.37
HIF1A-206ENST00000553999 UBIAD1Q9Y5Z9 338 aa23.62■■□□□ 1.37
HIF1A-206ENST00000553999 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.61■■□□□ 1.37
HIF1A-206ENST00000553999 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.61■■□□□ 1.37
HIF1A-206ENST00000553999 H3BRB1 525 aa23.61■■□□□ 1.37
HIF1A-206ENST00000553999 IQCF3P0C7M6 154 aa23.61■■□□□ 1.37
HIF1A-206ENST00000553999 HOXD8P13378 290 aaPredicted RBP23.61■■□□□ 1.37
HIF1A-206ENST00000553999 DNAJB2P25686 324 aa23.61■■□□□ 1.37
HIF1A-206ENST00000553999 RASGRP4Q8TDF6 673 aa23.61■■□□□ 1.37
HIF1A-206ENST00000553999 HERVK_113Q902F9 699 aa23.61■■□□□ 1.37
HIF1A-206ENST00000553999 GPRASP2Q96D09 838 aa23.61■■□□□ 1.37
HIF1A-206ENST00000553999 TUT1Q9H6E5 874 aaKnown RBP23.61■■□□□ 1.37
HIF1A-206ENST00000553999 PDRG1Q9NUG6 133 aa23.61■■□□□ 1.37
HIF1A-206ENST00000553999 SMIM10L2AP0DMW4 78 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 SMIM10L2BP0DMW5 78 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 KCNA2P16389 499 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 MARK3P27448 753 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 RABGGTBP53611 331 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 PKN1Q16512 942 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 SESTD1Q86VW0 696 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 RPUSD2Q8IZ73 545 aaKnown RBP23.6■■□□□ 1.37
HIF1A-206ENST00000553999 CCDC155Q8N6L0 562 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 AGXT2Q9BYV1 514 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 VPS54Q9P1Q0 977 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 TANC1Q9C0D5 1861 aa23.6■■□□□ 1.37
HIF1A-206ENST00000553999 hCG_1984214I3L0E3 225 aa23.59■■□□□ 1.37
HIF1A-206ENST00000553999 DDX39AO00148 427 aaKnown RBP23.59■■□□□ 1.37
HIF1A-206ENST00000553999 TCF7P36402 384 aaPredicted RBP23.59■■□□□ 1.37
HIF1A-206ENST00000553999 ZNF713Q8N859 430 aaPredicted RBP23.59■■□□□ 1.37
HIF1A-206ENST00000553999 MYLIPQ8WY64 445 aa23.59■■□□□ 1.37
HIF1A-206ENST00000553999 PBX4Q9BYU1 374 aa23.59■■□□□ 1.37
HIF1A-206ENST00000553999 MTIF3Q9H2K0 278 aaKnown RBP23.59■■□□□ 1.37
HIF1A-206ENST00000553999 SEMA6BQ9H3T3 888 aa23.59■■□□□ 1.37
HIF1A-206ENST00000553999 JADE2Q9NQC1 790 aa23.59■■□□□ 1.37
HIF1A-206ENST00000553999 NID2Q14112 1375 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 C17orf102A2RUQ5 167 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 PITPNM1O00562 1244 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 PRPF3O43395 683 aaKnown RBP23.58■■□□□ 1.37
HIF1A-206ENST00000553999 ARP10275 920 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 ZNF76P36508 570 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 RASIP1Q5U651 963 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 LRRC8DQ7L1W4 858 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 TIFAQ96CG3 184 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 MXRA8Q9BRK3 442 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 NKX2-4Q9H2Z4 354 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 SETD4Q9NVD3 440 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 SLC4A7Q9Y6M7 1214 aa23.58■■□□□ 1.37
HIF1A-206ENST00000553999 CTSHP09668 335 aa23.57■■□□□ 1.36
HIF1A-206ENST00000553999 CKBP12277 381 aa23.57■■□□□ 1.36
HIF1A-206ENST00000553999 MYOGP15173 224 aa23.57■■□□□ 1.36
HIF1A-206ENST00000553999 SELPP16109 830 aa23.57■■□□□ 1.36
HIF1A-206ENST00000553999 NTRK3Q16288 839 aa23.57■■□□□ 1.36
HIF1A-206ENST00000553999 ATP6V0A1Q93050 837 aa23.57■■□□□ 1.36
HIF1A-206ENST00000553999 CDHR1Q96JP9 859 aa23.57■■□□□ 1.36
HIF1A-206ENST00000553999 CDX2Q99626 313 aaPredicted RBP23.57■■□□□ 1.36
HIF1A-206ENST00000553999 KCNH7Q9NS40 1196 aa23.57■■□□□ 1.36
HIF1A-206ENST00000553999 CPLX1O14810 134 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 TREHO43280 583 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 THPOP40225 353 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 CLK2P49760 499 aaKnown RBP23.56■■□□□ 1.36
HIF1A-206ENST00000553999 ARHGAP4P98171 946 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 ZNF618Q5T7W0 954 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 CAGE1Q8TC20 777 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 AFAP1L1Q8TED9 768 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 SENP7Q9BQF6 1050 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 RNPEPQ9H4A4 650 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 C6orf50Q9HD87 102 aa23.56■■□□□ 1.36
HIF1A-206ENST00000553999 ZNF215Q9UL58 517 aaPredicted RBP23.56■■□□□ 1.36
HIF1A-206ENST00000553999 GSTTP1A0A1W2PQM5 241 aa23.55■■□□□ 1.36
HIF1A-206ENST00000553999 EPB41L2O43491 1005 aaKnown RBP23.55■■□□□ 1.36
HIF1A-206ENST00000553999 FOSP01100 380 aaPredicted RBP23.55■■□□□ 1.36
HIF1A-206ENST00000553999 SREBF1P36956 1147 aa23.55■■□□□ 1.36
HIF1A-206ENST00000553999 PTK7Q13308 1070 aa23.55■■□□□ 1.36
HIF1A-206ENST00000553999 AP3B2Q13367 1082 aa23.55■■□□□ 1.36
HIF1A-206ENST00000553999 REXO1Q8N1G1 1221 aaKnown RBP23.55■■□□□ 1.36
HIF1A-206ENST00000553999 FBXL16Q8N461 479 aa23.55■■□□□ 1.36
HIF1A-206ENST00000553999 GIMAP8Q8ND71 665 aaPredicted RBP23.55■■□□□ 1.36
HIF1A-206ENST00000553999 GLG1Q92896 1179 aa23.55■■□□□ 1.36
HIF1A-206ENST00000553999 AIFM3Q96NN9 605 aa23.55■■□□□ 1.36
HIF1A-206ENST00000553999 RNF26Q9BY78 433 aaPredicted RBP23.55■■□□□ 1.36
HIF1A-206ENST00000553999 JPH1Q9HDC5 661 aaPredicted RBP23.55■■□□□ 1.36
HIF1A-206ENST00000553999 STXBP5LQ9Y2K9 1186 aa23.55■■□□□ 1.36
HIF1A-206ENST00000553999 YBX2Q9Y2T7 364 aaKnown RBP23.55■■□□□ 1.36
HIF1A-206ENST00000553999 TRIP12Q14669 1992 aaPredicted RBP23.54■■□□□ 1.36
HIF1A-206ENST00000553999 ACTN1P12814 892 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms