RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 PLXNA3P51805 1871 aa17.88■□□□□ 0.45
BRF1-220ENST00000552127 B4DLN1 442 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 ZBTB5O15062 677 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 PRC1O43663 620 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 NBNO60934 754 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 CDC45O75419 566 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 SELPP16109 830 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 MRPL12P52815 198 aaKnown RBP17.87■□□□□ 0.45
BRF1-220ENST00000552127 NECTIN1Q15223 517 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 CLUL1Q15846 466 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 PTGISQ16647 500 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 SLC35G1Q2M3R5 365 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 EPC2Q52LR7 807 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 CASC1Q6TDU7 716 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 LRRC8DQ7L1W4 858 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 ERMP1Q7Z2K6 904 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 ATOH1Q92858 354 aaPredicted RBP17.87■□□□□ 0.45
BRF1-220ENST00000552127 NSUN3Q9H649 340 aaKnown RBP17.87■□□□□ 0.45
BRF1-220ENST00000552127 LY9Q9HBG7 655 aa17.87■□□□□ 0.45
BRF1-220ENST00000552127 RBM47A0AV96 593 aaKnown RBP17.86■□□□□ 0.45
BRF1-220ENST00000552127 PPP1R11O60927 126 aaPredicted RBP17.86■□□□□ 0.45
BRF1-220ENST00000552127 MCM5P33992 734 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 RPAINQ86UA6 219 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 ZNF654Q8IZM8 581 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 FBXL6Q8N531 539 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 SYTL5Q8TDW5 730 aaPredicted RBP17.86■□□□□ 0.45
BRF1-220ENST00000552127 TBC1D5Q92609 795 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 CTAGE1Q96RT6 745 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 RIOX1Q9H6W3 641 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 COL20A1Q9P218 1284 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 ATG2AQ2TAZ0 1938 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 MYO7AQ13402 2215 aa17.86■□□□□ 0.45
BRF1-220ENST00000552127 H3BNC9 293 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 SH2B2O14492 632 aaPredicted RBP17.85■□□□□ 0.45
BRF1-220ENST00000552127 MBTPS2O43462 519 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 EFCAB14O75071 495 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 DDAH1O94760 285 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 CHMP4BP1P59074 171 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 GPM6BQ13491 265 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 IKBKEQ14164 716 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 BRDTQ58F21 947 aaPredicted RBP17.85■□□□□ 0.45
BRF1-220ENST00000552127 HOMER1Q86YM7 354 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 TMEM87BQ96K49 555 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 PIGSQ96S52 555 aa17.85■□□□□ 0.45
BRF1-220ENST00000552127 MICAL3Q7RTP6 2002 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 NLRC5Q86WI3 1866 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 OPLAHO14841 1288 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 CYTH3O43739 400 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 KPNA6O60684 536 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 PARNO95453 639 aaKnown RBP17.84■□□□□ 0.45
BRF1-220ENST00000552127 NEFLP07196 543 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 HSD17B4P51659 736 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 GHRHRQ02643 423 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 DLX2Q07687 328 aaPredicted RBP17.84■□□□□ 0.45
BRF1-220ENST00000552127 TRAF1Q13077 416 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 PPP2R5BQ15173 497 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 RNF20Q5VTR2 975 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.84■□□□□ 0.45
BRF1-220ENST00000552127 SP7Q8TDD2 431 aaPredicted RBP17.84■□□□□ 0.45
BRF1-220ENST00000552127 NSUN6Q8TEA1 469 aaKnown RBP17.84■□□□□ 0.45
BRF1-220ENST00000552127 SCFD2Q8WU76 684 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 DHX38Q92620 1227 aaKnown RBP17.84■□□□□ 0.45
BRF1-220ENST00000552127 TAAR1Q96RJ0 339 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 MAP3K14Q99558 947 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 MYL10Q9BUA6 226 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 PCDHA1Q9Y5I3 950 aa17.84■□□□□ 0.45
BRF1-220ENST00000552127 A6NJR5 290 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 STXBP3O00186 592 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 CFBP00751 764 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 VCPP55072 806 aaKnown RBP17.83■□□□□ 0.44
BRF1-220ENST00000552127 HTRA4P83105 476 aaPredicted RBP17.83■□□□□ 0.44
BRF1-220ENST00000552127 COL9A3Q14050 684 aaPredicted RBP17.83■□□□□ 0.44
BRF1-220ENST00000552127 CTC1Q2NKJ3 1217 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 GDF6Q6KF10 455 aaPredicted RBP17.83■□□□□ 0.44
BRF1-220ENST00000552127 ASCL5Q7RTU5 278 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 CTCFLQ8NI51 663 aaPredicted RBP17.83■□□□□ 0.44
BRF1-220ENST00000552127 SAMD11Q96NU1 681 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 RMDN3Q96TC7 470 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 IRF2BPLQ9H1B7 796 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 VPS13AQ96RL7 3174 aa17.83■□□□□ 0.44
BRF1-220ENST00000552127 RIF1Q5UIP0 2472 aaKnown RBP17.82■□□□□ 0.44
BRF1-220ENST00000552127 DOCK5Q9H7D0 1870 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 PNMA6FA0A0J9YX94 578 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 CCDC69A6NI79 296 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 NKRFO15226 690 aaKnown RBP eCLIP17.82■□□□□ 0.44
BRF1-220ENST00000552127 NCK2O43639 380 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 CKBP12277 381 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 KIF5BP33176 963 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 LIFRP42702 1097 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 ZXDAP98168 799 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 RBL2Q08999 1139 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 TMTC2Q8N394 836 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 SPZ1Q9BXG8 430 aa17.82■□□□□ 0.44
BRF1-220ENST00000552127 MAP3K20Q9NYL2 800 aaKnown RBP17.82■□□□□ 0.44
BRF1-220ENST00000552127 COL4A6Q14031 1691 aa17.81■□□□□ 0.44
BRF1-220ENST00000552127 EIF2AK2P19525 551 aaKnown RBP17.81■□□□□ 0.44
BRF1-220ENST00000552127 ARHGEF16Q5VV41 709 aa17.81■□□□□ 0.44
BRF1-220ENST00000552127 MYOCDQ8IZQ8 938 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms