RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ADGRF4Q8IZF3 695 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 IL31RAQ8NI17 732 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 SYTL5Q8TDW5 730 aaPredicted RBP8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 EPHX3Q9H6B9 360 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 HELLSQ9NRZ9 838 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 MTCH2Q9Y6C9 303 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 CCDC171Q6TFL3 1326 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 PTPRSQ13332 1948 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 OPLAHO14841 1288 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 NBNO60934 754 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 LILRB3O75022 631 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 CABYRO75952 493 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 MYCLP12524 364 aaPredicted RBP8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 SDSP20132 328 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 EDNRBP24530 442 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 ARHGAP1Q07960 439 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 GRB10Q13322 594 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 COL9A3Q14050 684 aaPredicted RBP8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 MBTPS1Q14703 1052 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 PTGISQ16647 500 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 QRICH1Q2TAL8 776 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 LRRFIP1Q32MZ4 808 aaKnown RBP8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 CCDC62Q6P9F0 684 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 CYB5R4Q7L1T6 521 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 HERC6Q8IVU3 1022 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 EXOC6Q8TAG9 804 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 CD320Q9NPF0 282 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 HDAC6Q9UBN7 1215 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 ADD3Q9UEY8 706 aaKnown RBP8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 SYNPO2Q9UMS6 1093 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 NOD1Q9Y239 953 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 PCDHB3Q9Y5E6 796 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 PCDHA11Q9Y5I1 949 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 BAZ2BQ9UIF8 2168 aaKnown RBP8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 MYO7AQ13402 2215 aa8.01□□□□□ -1.13
PRPF40B-214ENST00000551320 A6NJR5 290 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 LPXNO60711 386 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 CFBP00751 764 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 MMP3P08254 477 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 SNHG28P0DPA3 235 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 RFC5P40937 340 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 CPT1AP50416 773 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 IRX6P78412 446 aaPredicted RBP8□□□□□ -1.13
PRPF40B-214ENST00000551320 SP2Q02086 613 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 PLEKHM2Q8IWE5 1019 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 RPUSD2Q8IZ73 545 aaKnown RBP8□□□□□ -1.13
PRPF40B-214ENST00000551320 ENAHQ8N8S7 591 aaPredicted RBP8□□□□□ -1.13
PRPF40B-214ENST00000551320 RETREG2Q8NC44 543 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 PNMA1Q8ND90 353 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 SCFD2Q8WU76 684 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 ATXN2LQ8WWM7 1075 aaKnown RBP8□□□□□ -1.13
PRPF40B-214ENST00000551320 SYMPKQ92797 1274 aaKnown RBP8□□□□□ -1.13
PRPF40B-214ENST00000551320 RMDN3Q96TC7 470 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 JMJD4Q9H9V9 463 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 ZSWIM5Q9P217 1185 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 SLC27A5Q9Y2P5 690 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 Q9Y3F1 56 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 SCN10AQ9Y5Y9 1956 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 WDFY4Q6ZS81 3184 aa8□□□□□ -1.13
PRPF40B-214ENST00000551320 ZNF213O14771 459 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 TLL1O43897 1013 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 RGS20O76081 388 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 WDR5P61964 334 aaKnown RBP7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 ZNF618Q5T7W0 954 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 FCHSD1Q86WN1 690 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 HOMER1Q86YM7 354 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 RAB11FIP4Q86YS3 637 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 ANKS1AQ92625 1134 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 ZBTB10Q96DT7 871 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 C17orf80Q9BSJ5 609 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 MTIF3Q9H2K0 278 aaKnown RBP7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 TCP11L1Q9NUJ3 509 aa7.99□□□□□ -1.13
PRPF40B-214ENST00000551320 UPP2O95045 317 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 GH1P01241 217 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 CTSHP09668 335 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 SUPT20HL2P0C7V6 817 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 CKBP12277 381 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 SP4Q02446 784 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 KIAA0753Q2KHM9 967 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 TRIM71Q2Q1W2 868 aaKnown RBP7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 HSDL1Q3SXM5 330 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 ARHGEF16Q5VV41 709 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 NFRKBQ6P4R8 1299 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 TRAF7Q6Q0C0 670 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 BLOC1S3Q6QNY0 202 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 LRRC8DQ7L1W4 858 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 SKAP1Q86WV1 359 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 FBXO11Q86XK2 927 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 TRIM50Q86XT4 487 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 ZSCAN10Q96SZ4 725 aaPredicted RBP7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 KAT14Q9H8E8 782 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 PXMP2Q9NR77 195 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 RTEL1Q9NZ71 1219 aa7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 DDX41Q9UJV9 622 aaKnown RBP7.98□□□□□ -1.13
PRPF40B-214ENST00000551320 MYH7BA7E2Y1 1941 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 hCG_1642624A0A1W2PR95 340 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 NR3C2P08235 984 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 SELPP16109 830 aa7.97□□□□□ -1.13
PRPF40B-214ENST00000551320 IBSPP21815 317 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms