RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 GMCL1P1Q8NEA9 526 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 SPPL3Q8TCT6 385 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 CHURC1Q8WUH1 139 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 STAG1Q8WVM7 1258 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 POF1BQ8WVV4 589 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 CLP1Q92989 425 aaKnown RBP8.07□□□□□ -1.12
LIN7A-202ENST00000549417 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 MTMR4Q9NYA4 1195 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 METRNQ9UJH8 293 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 PRR12Q9ULL5 1215 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 TNNQ9UQP3 1299 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 RWDD3Q9Y3V2 267 aa8.07□□□□□ -1.12
LIN7A-202ENST00000549417 PLXNA4Q9HCM2 1894 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 MYH7BA7E2Y1 1941 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 DCDC2BA2VCK2 349 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 C2CD4DB7Z1M9 353 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 TTLL1O95922 423 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 GH1P01241 217 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 CLCN5P51795 746 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 ATXN1P54253 815 aaKnown RBP8.06□□□□□ -1.12
LIN7A-202ENST00000549417 COL9A3Q14050 684 aaPredicted RBP8.06□□□□□ -1.12
LIN7A-202ENST00000549417 DGKDQ16760 1214 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 PAN2Q504Q3 1202 aaKnown RBP8.06□□□□□ -1.12
LIN7A-202ENST00000549417 LLGL2Q6P1M3 1020 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 CCDC105Q8IYK2 499 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 FAM9BQ8IZU0 186 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 DTWD2Q8NBA8 298 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 KLHL23Q8NBE8 558 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 MICAL1Q8TDZ2 1067 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 MKL1Q969V6 931 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 HAUS7Q99871 368 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 MRPL42Q9Y6G3 142 aaKnown RBP8.06□□□□□ -1.12
LIN7A-202ENST00000549417 SPEGQ15772 3267 aa8.06□□□□□ -1.12
LIN7A-202ENST00000549417 ZBED9Q6R2W3 1325 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 ANKRD11Q6UB99 2663 aaPredicted RBP8.05□□□□□ -1.12
LIN7A-202ENST00000549417 ICAM1P05362 532 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 ADD2P35612 726 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 SLC16A2P36021 539 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 TECP42680 631 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 CCDC62Q6P9F0 684 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 SERINC5Q86VE9 423 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 RUBCNQ92622 972 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 NEK1Q96PY6 1258 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 KATNAL1Q9BW62 490 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 PLVAPQ9BX97 442 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 S1PR5Q9H228 398 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 RC3H2Q9HBD1 1191 aaKnown RBP8.05□□□□□ -1.12
LIN7A-202ENST00000549417 NR2E1Q9Y466 385 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 PCDHB13Q9Y5F0 798 aa8.05□□□□□ -1.12
LIN7A-202ENST00000549417 OTOGLQ3ZCN5 2332 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 HAS3O00219 553 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 TREHO43280 583 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 NPR3P17342 541 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 AOC1P19801 751 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 IBSPP21815 317 aaPredicted RBP8.04□□□□□ -1.12
LIN7A-202ENST00000549417 EDNRBP24530 442 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 VASPP50552 380 aaPredicted RBP8.04□□□□□ -1.12
LIN7A-202ENST00000549417 RPS6P62753 249 aaKnown RBP8.04□□□□□ -1.12
LIN7A-202ENST00000549417 ATP8B2P98198 1209 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 RNF207Q6ZRF8 634 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 ZNF444Q8N0Y2 327 aaPredicted RBP8.04□□□□□ -1.12
LIN7A-202ENST00000549417 SSH3Q8TE77 659 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 ATP8B4Q8TF62 1192 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 ATP6V0A1Q93050 837 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 MPHOSPH6Q99547 160 aaKnown RBP8.04□□□□□ -1.12
LIN7A-202ENST00000549417 PUS7LQ9H0K6 701 aaKnown RBP8.04□□□□□ -1.12
LIN7A-202ENST00000549417 IL1RAPL2Q9NP60 686 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 SH2B1Q9NRF2 756 aaPredicted RBP8.04□□□□□ -1.12
LIN7A-202ENST00000549417 ARPP21Q9UBL0 812 aaPredicted RBP8.04□□□□□ -1.12
LIN7A-202ENST00000549417 LIMD1Q9UGP4 676 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 ZZEF1O43149 2961 aa8.04□□□□□ -1.12
LIN7A-202ENST00000549417 LOC102724159A0A0B4J2E5 919 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 STK25O00506 426 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 F2P00734 622 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 WEE2P0C1S8 567 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 GATMP50440 423 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 PWP2Q15269 919 aaKnown RBP8.03□□□□□ -1.12
LIN7A-202ENST00000549417 DUSP6Q16828 381 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 KIAA0319Q5VV43 1072 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 TTBK2Q6IQ55 1244 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 RCSD1Q6JBY9 416 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 ANKRD54Q6NXT1 300 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 SYCE2Q6PIF2 218 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 CLEC4DQ8WXI8 215 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 P2RX5Q93086 422 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 CLUAP1Q96AJ1 413 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 ZNF689Q96CS4 500 aaPredicted RBP8.03□□□□□ -1.12
LIN7A-202ENST00000549417 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 SEMA4AQ9H3S1 761 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 POMKQ9H5K3 350 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 BMP2KQ9NSY1 1161 aaPredicted RBP8.03□□□□□ -1.12
LIN7A-202ENST00000549417 EXOC6BQ9Y2D4 811 aa8.03□□□□□ -1.12
LIN7A-202ENST00000549417 SUPT16HQ9Y5B9 1047 aaKnown RBP8.03□□□□□ -1.12
LIN7A-202ENST00000549417 FASNP49327 2511 aaKnown RBP8.03□□□□□ -1.12
LIN7A-202ENST00000549417 FAM208BQ5VWN6 2430 aa8.02□□□□□ -1.13
LIN7A-202ENST00000549417 SETXQ7Z333 2677 aaKnown RBP8.02□□□□□ -1.13
LIN7A-202ENST00000549417 KIAA1217Q5T5P2 1943 aa8.02□□□□□ -1.13
LIN7A-202ENST00000549417 C17orf102A2RUQ5 167 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms