RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 SENP7Q9BQF6 1050 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 ZNF577Q9BSK1 485 aa18.46■□□□□ 0.55
LIMS2-217ENST00000545738 DDX39AO00148 427 aaKnown RBP18.45■□□□□ 0.54
LIMS2-217ENST00000545738 DYNC1LI2O43237 492 aaPredicted RBP18.45■□□□□ 0.54
LIMS2-217ENST00000545738 PSMD10O75832 226 aa18.45■□□□□ 0.54
LIMS2-217ENST00000545738 BEX3Q00994 111 aa18.45■□□□□ 0.54
LIMS2-217ENST00000545738 IL17AQ16552 155 aa18.45■□□□□ 0.54
LIMS2-217ENST00000545738 NOL7Q9UMY1 257 aaKnown RBP18.45■□□□□ 0.54
LIMS2-217ENST00000545738 WDR81Q562E7 1941 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 MAFGO15525 162 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 RARBP10826 455 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
LIMS2-217ENST00000545738 SP4Q02446 784 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 CEBPZQ03701 1054 aaKnown RBP18.44■□□□□ 0.54
LIMS2-217ENST00000545738 SPIRE1Q08AE8 756 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 PTGDRQ13258 359 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 PTPAQ15257 358 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 SF3A1Q15459 793 aaKnown RBP18.44■□□□□ 0.54
LIMS2-217ENST00000545738 B3GNT9Q6UX72 402 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 CDHR1Q96JP9 859 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 UPF3AQ9H1J1 476 aaKnown RBP18.44■□□□□ 0.54
LIMS2-217ENST00000545738 XPNPEP3Q9NQH7 507 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 VAV3Q9UKW4 847 aa18.44■□□□□ 0.54
LIMS2-217ENST00000545738 GJA9P57773 515 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 DNM1Q05193 864 aaKnown RBP18.43■□□□□ 0.54
LIMS2-217ENST00000545738 KCNV1Q6PIU1 500 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 METTL7BQ6UX53 244 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 OR6J1Q8NGC5 347 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 U2AF1L4Q8WU68 220 aaKnown RBP18.43■□□□□ 0.54
LIMS2-217ENST00000545738 AFG1LQ8WV93 481 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 EMID1Q96A84 441 aaPredicted RBP18.43■□□□□ 0.54
LIMS2-217ENST00000545738 CRISPLD2Q9H0B8 497 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 TFIP11Q9UBB9 837 aaKnown RBP18.43■□□□□ 0.54
LIMS2-217ENST00000545738 NFASCO94856 1347 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 GH1P01241 217 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 GJB1P08034 283 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 PDIA4P13667 645 aaKnown RBP18.43■□□□□ 0.54
LIMS2-217ENST00000545738 GRIN1Q05586 938 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 CALCRLQ16602 461 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 CCSAPQ6IQ19 270 aaPredicted RBP18.43■□□□□ 0.54
LIMS2-217ENST00000545738 DHX37Q8IY37 1157 aaKnown RBP18.43■□□□□ 0.54
LIMS2-217ENST00000545738 ABHD8Q96I13 439 aa18.43■□□□□ 0.54
LIMS2-217ENST00000545738 EML1O00423 815 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 C6orf222P0C671 652 aaPredicted RBP18.42■□□□□ 0.54
LIMS2-217ENST00000545738 NKX3-2P78367 333 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 ATP2C1P98194 919 aaPredicted RBP18.42■□□□□ 0.54
LIMS2-217ENST00000545738 NEDD9Q14511 834 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 LRCH2Q5VUJ6 765 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 KLHDC9Q8NEP7 349 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 SPATA33Q96N06 139 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 GPR20Q99678 358 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 UNC45AQ9H3U1 944 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 JPH1Q9HDC5 661 aaPredicted RBP18.42■□□□□ 0.54
LIMS2-217ENST00000545738 OGDHLQ9ULD0 1010 aa18.42■□□□□ 0.54
LIMS2-217ENST00000545738 GSTTP1A0A1W2PQM5 241 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 A6NJR5 290 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 TBX3O15119 743 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 NKRFO15226 690 aaKnown RBP eCLIP18.41■□□□□ 0.54
LIMS2-217ENST00000545738 SGPL1O95470 568 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 MMP3P08254 477 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 OR52Z1P0C646 297 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 NUCB2P80303 420 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 LRRC41Q15345 812 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 NAP1L4Q99733 375 aaKnown RBP18.41■□□□□ 0.54
LIMS2-217ENST00000545738 MLXIPQ9HAP2 919 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 SLC9A2Q9UBY0 812 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 CIZ1Q9ULV3 898 aaPredicted RBP18.41■□□□□ 0.54
LIMS2-217ENST00000545738 Q9Y3F1 56 aa18.41■□□□□ 0.54
LIMS2-217ENST00000545738 CHMP2AO43633 222 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 MSCO60682 206 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 TXKP42681 527 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 GJA8P48165 433 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 FSCN1Q16658 493 aaKnown RBP18.4■□□□□ 0.54
LIMS2-217ENST00000545738 TRIM50Q86XT4 487 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 PPTC7Q8NI37 304 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 FAM20AQ96MK3 541 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 PCYT2Q99447 389 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 RIT2Q99578 217 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 TTC12Q9H892 705 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-217ENST00000545738 POTEMA6NI47 508 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 GAS7O60861 476 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-217ENST00000545738 HOXD8P13378 290 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-217ENST00000545738 NASPP49321 788 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-217ENST00000545738 ACTR2P61160 394 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 ORC2Q13416 577 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-217ENST00000545738 LAMC2Q13753 1193 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 PPP1R13LQ8WUF5 828 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 SDF4Q9BRK5 362 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 TBC1D22BQ9NU19 505 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 POLR3EQ9NVU0 708 aa18.4■□□□□ 0.54
LIMS2-217ENST00000545738 LINC00301Q8NCQ3 95 aa18.39■□□□□ 0.53
LIMS2-217ENST00000545738 DIS3LQ8TF46 1054 aaKnown RBP18.39■□□□□ 0.53
LIMS2-217ENST00000545738 ZNF286BP0CG31 522 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 PRKCSHP14314 528 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-217ENST00000545738 EN2P19622 333 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-217ENST00000545738 CST5P28325 142 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-217ENST00000545738 MARCKSP29966 332 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-217ENST00000545738 TECP42680 631 aa18.38■□□□□ 0.53
LIMS2-217ENST00000545738 PPP2R5CQ13362 524 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms