RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MRPS9P82933 396 aaKnown RBP10.43□□□□□ -0.74
GNE-206ENST00000543356 BAATQ14032 418 aaPredicted RBP10.43□□□□□ -0.74
GNE-206ENST00000543356 B3GNT9Q6UX72 402 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 UNC13DQ70J99 1090 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 FASTKD5Q7L8L6 764 aaKnown RBP10.43□□□□□ -0.74
GNE-206ENST00000543356 MED15Q96RN5 788 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 RMDN3Q96TC7 470 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 TEKT3Q9BXF9 490 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 TUFT1Q9NNX1 390 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 EXOC1Q9NV70 894 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 RWDD2AQ9UIY3 292 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 KIAA1024Q9UPX6 916 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 PTMAP06454 111 aaKnown RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 POTEJP0CG39 1038 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 SPATA31C1P0DKV0 1188 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 ZNF18P17022 549 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 IRX3P78415 501 aaPredicted RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 PABPC4Q13310 644 aaKnown RBP eCLIP10.42□□□□□ -0.74
GNE-206ENST00000543356 ARHGEF16Q5VV41 709 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 SPATA1Q5VX52 437 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 MAP1SQ66K74 1059 aaPredicted RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 CATSPER3Q86XQ3 398 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 RIOX2Q8IUF8 465 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 SMYD4Q8IYR2 804 aaPredicted RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 UIMC1Q96RL1 719 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 FANCLQ9NW38 375 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 CYP39A1Q9NYL5 469 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 FBXO40Q9UH90 709 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 NFE2L3Q9Y4A8 694 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 LOXHD1Q8IVV2 1947 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 IPO5O00410 1097 aaKnown RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 TPM3P06753 285 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 PLA2G4BP0C869 781 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 EIF2AK2P19525 551 aaKnown RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 CCND2P30279 289 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 PAK1Q13153 545 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 POTEEQ6S8J3 1075 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 TRMT44Q8IYL2 757 aaKnown RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 ADSSL1Q8N142 457 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 NEK9Q8TD19 979 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 EIF2AK1Q9BQI3 630 aaKnown RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 AGO4Q9HCK5 861 aaKnown RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 A1CFQ9NQ94 594 aaKnown RBP10.42□□□□□ -0.74
GNE-206ENST00000543356 CTNND2Q9UQB3 1225 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 GDAQ9Y2T3 454 aa10.42□□□□□ -0.74
GNE-206ENST00000543356 POTEFA5A3E0 1075 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 EML1O00423 815 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 TRAF5O00463 557 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 FANCCQ00597 558 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 PDE4DQ08499 809 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 SNAPC2Q13487 334 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 STIM1Q13586 685 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 PLS1Q14651 629 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 POTEGQ6S5H5 508 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.41□□□□□ -0.74
GNE-206ENST00000543356 HSD17B14Q9BPX1 270 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 ASCC2Q9H1I8 757 aaPredicted RBP10.41□□□□□ -0.74
GNE-206ENST00000543356 UNC45AQ9H3U1 944 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 KCNH7Q9NS40 1196 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 BTBD7Q9P203 1132 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 LRRC37A2A6NM11 1700 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 PFASO15067 1338 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 E9PMD0 336 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 CBFA2T2O43439 604 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 STAM2O75886 525 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 OSBPP22059 807 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 COPB2P35606 906 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 GJA5P36382 358 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 PRCPP42785 496 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 SLC12A3P55017 1021 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 HERVK_113P62684 666 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 EHHADHQ08426 723 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 PSMD2Q13200 908 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 MTMR1Q13613 665 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 DHX8Q14562 1220 aaKnown RBP10.41□□□□□ -0.74
GNE-206ENST00000543356 EPHA7Q15375 998 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 KLHL10Q6JEL2 608 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 GPAT2Q6NUI2 795 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 VSIG10LQ86VR7 867 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 NSUN6Q8TEA1 469 aaKnown RBP10.41□□□□□ -0.74
GNE-206ENST00000543356 NELFBQ8WX92 580 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 DDX12PQ92771 950 aa10.41□□□□□ -0.74
GNE-206ENST00000543356 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
GNE-206ENST00000543356 OFD1O75665 1012 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 CNMDO75829 334 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 ATP1A3P13637 1013 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 CDKAL1Q5VV42 579 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 GPRASP2Q96D09 838 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 DNAJC19Q96DA6 116 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 SLC10A4Q96EP9 437 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 DHTKD1Q96HY7 919 aaPredicted RBP10.4□□□□□ -0.74
GNE-206ENST00000543356 XPO4Q9C0E2 1151 aaKnown RBP10.4□□□□□ -0.74
GNE-206ENST00000543356 SPATC1LQ9H0A9 340 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 RRAGCQ9HB90 399 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 TBC1D22BQ9NU19 505 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 IFNKQ9P0W0 207 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 DNM3Q9UQ16 869 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 PSMA7O14818 248 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 DHX15O43143 795 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms