RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
MSH6-210ENST00000540021 MTMR3Q13615 1198 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 UNC13DQ70J99 1090 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 PACSIN1Q9BY11 444 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 MAGEF1Q9HAY2 307 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 HAUS2Q9NVX0 235 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 MTRF1LQ9UGC7 380 aaKnown RBP14.18□□□□□ -0.14
MSH6-210ENST00000540021 SWAP70Q9UH65 585 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 EIF4E1BA6NMX2 242 aaKnown RBP14.18□□□□□ -0.14
MSH6-210ENST00000540021 FGFR2P21802 821 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 NEDD9Q14511 834 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 TBC1D1Q86TI0 1168 aaPredicted RBP14.18□□□□□ -0.14
MSH6-210ENST00000540021 ERMNQ8TAM6 284 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 AENQ8WTP8 325 aaKnown RBP14.18□□□□□ -0.14
MSH6-210ENST00000540021 MINPP1Q9UNW1 487 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 RIMBP2O15034 1052 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 PRPF6O94906 941 aaKnown RBP14.18□□□□□ -0.14
MSH6-210ENST00000540021 FAM13AO94988 1023 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 ZKSCAN8Q15776 578 aaPredicted RBP14.18□□□□□ -0.14
MSH6-210ENST00000540021 USH1GQ495M9 461 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 HOOK3Q86VS8 718 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 CASKIN2Q8WXE0 1202 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 RPGRQ92834 1020 aaKnown RBP14.18□□□□□ -0.14
MSH6-210ENST00000540021 SEMA6BQ9H3T3 888 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 BARHL2Q9NY43 387 aa14.18□□□□□ -0.14
MSH6-210ENST00000540021 LOC102724428A0A0B4J2F2 783 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 NPHP3-ACAD11A0A0J9YXS1 232 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 ERVV-1B6SEH8 477 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 FGGP02679 453 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 SIK1P57059 783 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 ZNF211Q13398 564 aaPredicted RBP14.17□□□□□ -0.14
MSH6-210ENST00000540021 TRADDQ15628 312 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 OTUD6AQ7L8S5 288 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 CCDC105Q8IYK2 499 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 TAF1DQ9H5J8 278 aaPredicted RBP14.17□□□□□ -0.14
MSH6-210ENST00000540021 MLXIPLQ9NP71 852 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 RIC1Q4ADV7 1423 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 SETD1AO15047 1707 aaKnown RBP14.17□□□□□ -0.14
MSH6-210ENST00000540021 AGPSO00116 658 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 GRIPAP1Q4V328 841 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 GLE1Q53GS7 698 aaKnown RBP14.17□□□□□ -0.14
MSH6-210ENST00000540021 GALNT17Q6IS24 598 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 DGKHQ86XP1 1220 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 KIRREL3Q8IZU9 778 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 ANKRD2Q9GZV1 360 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 EMILIN3Q9NT22 766 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 PKD2L1Q9P0L9 805 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 SPOPO43791 374 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 LRRN2O75325 713 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 CYP2J2P51589 502 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 LRRC63Q05C16 580 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 TPTE2Q6XPS3 522 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 MICAL1Q8TDZ2 1067 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 NSUN4Q96CB9 384 aaKnown RBP14.17□□□□□ -0.14
MSH6-210ENST00000540021 CELF4Q9BZC1 486 aaKnown RBP14.17□□□□□ -0.14
MSH6-210ENST00000540021 RNF14Q9UBS8 474 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 C1orf167Q5SNV9 1468 aa14.17□□□□□ -0.14
MSH6-210ENST00000540021 SART1O43290 800 aaKnown RBP14.16□□□□□ -0.14
MSH6-210ENST00000540021 STAT1P42224 750 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 PTGISQ16647 500 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 PRR16Q569H4 304 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 TMED8Q6PL24 325 aaPredicted RBP14.16□□□□□ -0.14
MSH6-210ENST00000540021 CCDC63Q8NA47 563 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 MDM1Q8TC05 714 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 ERGIC2Q96RQ1 377 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 ELAC2Q9BQ52 826 aaKnown RBP14.16□□□□□ -0.14
MSH6-210ENST00000540021 RIOK1Q9BRS2 568 aaKnown RBP14.16□□□□□ -0.14
MSH6-210ENST00000540021 DNAJC17Q9NVM6 304 aaKnown RBP14.16□□□□□ -0.14
MSH6-210ENST00000540021 KBTBD4Q9NVX7 518 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 SNX24Q9Y343 169 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 ATP6V0A2Q9Y487 856 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 ZNF804BA4D1E1 1349 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 A0A087X0T9 212 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 SFI1A8K8P3 1242 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 USP17L5A8MUK1 530 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 FAM228BP0C875 321 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 RPL13P26373 211 aaKnown RBP14.16□□□□□ -0.14
MSH6-210ENST00000540021 COPB2P35606 906 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 CALCOCO2Q13137 446 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 NAALADL2Q58DX5 795 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 CCDC197Q8NCU1 140 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 MYCBPAPQ8TBZ2 947 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 TLR10Q9BXR5 811 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 INTS9Q9NV88 658 aaKnown RBP14.16□□□□□ -0.14
MSH6-210ENST00000540021 HDAC9Q9UKV0 1011 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 RPS6KA5O75582 802 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 BTDP43251 543 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 KCNH2Q12809 1159 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 ZNF804AQ7Z570 1209 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 CLEC10AQ8IUN9 316 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 ZNF507Q8TCN5 953 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 SLC24A3Q9HC58 644 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 RIC8AQ9NPQ8 531 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 CEP72Q9P209 647 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 BCS1LQ9Y276 419 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 LTN1O94822 1766 aa14.16□□□□□ -0.14
MSH6-210ENST00000540021 ZNF263O14978 683 aa14.15□□□□□ -0.14
MSH6-210ENST00000540021 COASYQ13057 564 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms