RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 KRT25Q7Z3Z0 450 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 PLA2G4DQ86XP0 818 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 SLC43A3Q8NBI5 491 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 GJA10Q969M2 543 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 GLT1D1Q96MS3 346 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 GPR20Q99678 358 aa20.36■□□□□ 0.85
DDX55-204ENST00000536079 DOCK5Q9H7D0 1870 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 WNT7AO00755 349 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 ZNF286BP0CG31 522 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 TLE2Q04725 743 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 ITGA7Q13683 1181 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 NONOQ15233 471 aaKnown RBP eCLIP20.35■□□□□ 0.85
DDX55-204ENST00000536079 PRR16Q569H4 304 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 C1orf53Q5VUE5 145 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 NIPA1Q7RTP0 329 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 DIS3L2Q8IYB7 885 aaKnown RBP20.35■□□□□ 0.85
DDX55-204ENST00000536079 C8orf76Q96K31 380 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 MTG1Q9BT17 334 aaPredicted RBP20.35■□□□□ 0.85
DDX55-204ENST00000536079 POLR3EQ9NVU0 708 aa20.35■□□□□ 0.85
DDX55-204ENST00000536079 GSTTP1A0A1W2PQM5 241 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 H0YGN5 161 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 ARVCFO00192 962 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 MAFGO15525 162 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 DHX15O43143 795 aaKnown RBP20.34■□□□□ 0.85
DDX55-204ENST00000536079 GJB2P29033 226 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 USP11P51784 963 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 SH3RF1Q7Z6J0 888 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 FAM184AQ8NB25 1140 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 FBXO18Q8NFZ0 1043 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 CDHR1Q96JP9 859 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 C16orf70Q9BSU1 422 aa20.34■□□□□ 0.85
DDX55-204ENST00000536079 ZMYND8Q9ULU4 1186 aaPredicted RBP20.34■□□□□ 0.85
DDX55-204ENST00000536079 A0A0U1RQG5 324 aaPredicted RBP20.33■□□□□ 0.85
DDX55-204ENST00000536079 CCDC194A0A1B0GVG4 234 aa20.33■□□□□ 0.85
DDX55-204ENST00000536079 KIF28PB7ZC32 967 aa20.33■□□□□ 0.85
DDX55-204ENST00000536079 PQBP1O60828 265 aaKnown RBP20.33■□□□□ 0.85
DDX55-204ENST00000536079 CABYRO75952 493 aa20.33■□□□□ 0.85
DDX55-204ENST00000536079 SYN1P17600 705 aa20.33■□□□□ 0.85
DDX55-204ENST00000536079 TRIM29Q14134 588 aa20.33■□□□□ 0.85
DDX55-204ENST00000536079 DGKDQ16760 1214 aa20.33■□□□□ 0.85
DDX55-204ENST00000536079 NBPF20Q3BBV1 942 aa20.33■□□□□ 0.85
DDX55-204ENST00000536079 MBOAT7Q96N66 472 aa20.33■□□□□ 0.85
DDX55-204ENST00000536079 CYP3A7-CYP3A51PA0A087WV96 503 aa20.32■□□□□ 0.84
DDX55-204ENST00000536079 DDX39AO00148 427 aaKnown RBP20.32■□□□□ 0.84
DDX55-204ENST00000536079 MSH4O15457 936 aa20.32■□□□□ 0.84
DDX55-204ENST00000536079 SLC37A4O43826 429 aa20.32■□□□□ 0.84
DDX55-204ENST00000536079 CCNE2O96020 404 aa20.32■□□□□ 0.84
DDX55-204ENST00000536079 CYP3A7P24462 503 aa20.32■□□□□ 0.84
DDX55-204ENST00000536079 CHMP4BP1P59074 171 aa20.32■□□□□ 0.84
DDX55-204ENST00000536079 LETM2Q2VYF4 491 aa20.32■□□□□ 0.84
DDX55-204ENST00000536079 BRDTQ58F21 947 aaPredicted RBP20.32■□□□□ 0.84
DDX55-204ENST00000536079 TRIM50Q86XT4 487 aa20.32■□□□□ 0.84
DDX55-204ENST00000536079 TRIM43BA6NCK2 446 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 RBAK-RBAKDNI3L0D1 243 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 KPNA6O60684 536 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 PPFIA4O75335 1185 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 LGALS2P05162 132 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 FAAP100Q0VG06 881 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 HIC1Q14526 733 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 Q4G0T1 1027 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 UTP14CQ5TAP6 766 aaKnown RBP20.31■□□□□ 0.84
DDX55-204ENST00000536079 ANKRD33Q7Z3H0 272 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 FAM126BQ8IXS8 530 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 SNX21Q969T3 373 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 TRIM43Q96BQ3 446 aaPredicted RBP20.31■□□□□ 0.84
DDX55-204ENST00000536079 PCYT2Q99447 389 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 ZNF577Q9BSK1 485 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 TRPV6Q9H1D0 765 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 PDLIM7Q9NR12 457 aa20.31■□□□□ 0.84
DDX55-204ENST00000536079 NFASCO94856 1347 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 HAS3O00219 553 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 IPO5O00410 1097 aaKnown RBP20.3■□□□□ 0.84
DDX55-204ENST00000536079 NOP56O00567 594 aaKnown RBP20.3■□□□□ 0.84
DDX55-204ENST00000536079 F2P00734 622 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 ITGB8P26012 769 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 PSEN2P49810 448 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 MFSD10Q14728 455 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 NEK8Q86SG6 692 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 GIMAP8Q8ND71 665 aaPredicted RBP20.3■□□□□ 0.84
DDX55-204ENST00000536079 BRMS1Q9HCU9 246 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 JPH1Q9HDC5 661 aaPredicted RBP20.3■□□□□ 0.84
DDX55-204ENST00000536079 FOXD4L1Q9NU39 408 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 SLC9A2Q9UBY0 812 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 SMC3Q9UQE7 1217 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 SCN10AQ9Y5Y9 1956 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 PDE4DIPQ5VU43 2346 aa20.3■□□□□ 0.84
DDX55-204ENST00000536079 K7ELQ4 463 aaPredicted RBP20.29■□□□□ 0.84
DDX55-204ENST00000536079 B4GALT4O60513 344 aa20.29■□□□□ 0.84
DDX55-204ENST00000536079 CD4P01730 458 aa20.29■□□□□ 0.84
DDX55-204ENST00000536079 TCF7P36402 384 aaPredicted RBP20.29■□□□□ 0.84
DDX55-204ENST00000536079 ACTR2P61160 394 aa20.29■□□□□ 0.84
DDX55-204ENST00000536079 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
DDX55-204ENST00000536079 SEPT1Q8WYJ6 367 aa20.29■□□□□ 0.84
DDX55-204ENST00000536079 SDF4Q9BRK5 362 aa20.29■□□□□ 0.84
DDX55-204ENST00000536079 TRMT13Q9NUP7 481 aaKnown RBP20.29■□□□□ 0.84
DDX55-204ENST00000536079 KIAA0753Q2KHM9 967 aa20.28■□□□□ 0.84
DDX55-204ENST00000536079 MOXD1Q6UVY6 613 aa20.28■□□□□ 0.84
DDX55-204ENST00000536079 ETNPPLQ8TBG4 499 aa20.28■□□□□ 0.84
DDX55-204ENST00000536079 SLC5A5Q92911 643 aa20.28■□□□□ 0.84
DDX55-204ENST00000536079 TOX2Q96NM4 488 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms