RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 UPF3BQ9BZI7 483 aaKnown RBP25.11■■□□□ 1.61
NDUFS3-210ENST00000533105 MTIF3Q9H2K0 278 aaKnown RBP25.11■■□□□ 1.61
NDUFS3-210ENST00000533105 TMEM260Q9NX78 707 aa25.11■■□□□ 1.61
NDUFS3-210ENST00000533105 UBIAD1Q9Y5Z9 338 aa25.11■■□□□ 1.61
NDUFS3-210ENST00000533105 NID2Q14112 1375 aa25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 H3BRB1 525 aa25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 IQCF3P0C7M6 154 aa25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 TOB2Q14106 344 aaPredicted RBP25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 UTP14CQ5TAP6 766 aaKnown RBP25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 RASIP1Q5U651 963 aa25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 GIMAP8Q8ND71 665 aaPredicted RBP25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 CTAGE1Q96RT6 745 aa25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 GLT8D2Q9H1C3 349 aa25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 TUT1Q9H6E5 874 aaKnown RBP25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 CXXC1Q9P0U4 656 aaPredicted RBP25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 TELO2Q9Y4R8 837 aa25.1■■□□□ 1.61
NDUFS3-210ENST00000533105 GRXCR1A8MXD5 290 aa25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 PRPF3O43395 683 aaKnown RBP25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 ATP9AO75110 1047 aa25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 FOSP01100 380 aaPredicted RBP25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 ZNF200P98182 395 aaPredicted RBP25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 CAGE1Q8TC20 777 aa25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 LARP6Q9BRS8 491 aaKnown RBP25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 ANO3Q9BYT9 981 aa25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 TM6SF1Q9BZW5 370 aa25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 NCOA5Q9HCD5 579 aaKnown RBP25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 JADE2Q9NQC1 790 aa25.09■■□□□ 1.61
NDUFS3-210ENST00000533105 ZBBXA8MT70 800 aa25.08■■□□□ 1.61
NDUFS3-210ENST00000533105 KCNA2P16389 499 aa25.08■■□□□ 1.61
NDUFS3-210ENST00000533105 EVCP57679 992 aa25.08■■□□□ 1.61
NDUFS3-210ENST00000533105 TEX2Q8IWB9 1127 aa25.08■■□□□ 1.61
NDUFS3-210ENST00000533105 DHX38Q92620 1227 aaKnown RBP25.08■■□□□ 1.61
NDUFS3-210ENST00000533105 VWCEQ96DN2 955 aa25.08■■□□□ 1.61
NDUFS3-210ENST00000533105 SLC26A6Q9BXS9 759 aa25.08■■□□□ 1.61
NDUFS3-210ENST00000533105 SEMA6BQ9H3T3 888 aa25.08■■□□□ 1.61
NDUFS3-210ENST00000533105 PFKMP08237 780 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 DNAJB2P25686 324 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 RFC2P35250 354 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 AP3B2Q13367 1082 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 PKN1Q16512 942 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 JAKMIP3Q5VZ66 844 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 TRIM50Q86XT4 487 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 AFAP1L1Q8TED9 768 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 GUCD1Q96NT3 240 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 MXRA8Q9BRK3 442 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 FTOQ9C0B1 505 aaKnown RBP eCLIP25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 PDRG1Q9NUG6 133 aa25.07■■□□□ 1.6
NDUFS3-210ENST00000533105 C17orf102A2RUQ5 167 aa25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 MAFGO15525 162 aa25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 CLK2P49760 499 aaKnown RBP25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 PTK7Q13308 1070 aa25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 HIC1Q14526 733 aa25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 NTRK3Q16288 839 aa25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 CYP2W1Q8TAV3 490 aa25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 CCDC12Q8WUD4 166 aaPredicted RBP25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 TTYH1Q9H313 450 aaPredicted RBP25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 C6orf50Q9HD87 102 aa25.06■■□□□ 1.6
NDUFS3-210ENST00000533105 SMIM10L2AP0DMW4 78 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 SMIM10L2BP0DMW5 78 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 SELPP16109 830 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 IFNAR1P17181 557 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 PBX2P40425 430 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 TIFAQ96CG3 184 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 RNF26Q9BY78 433 aaPredicted RBP25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 PBX4Q9BYU1 374 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 KCNH7Q9NS40 1196 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 ZNF215Q9UL58 517 aaPredicted RBP25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 STXBP5LQ9Y2K9 1186 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 SLC4A7Q9Y6M7 1214 aa25.05■■□□□ 1.6
NDUFS3-210ENST00000533105 DOCK5Q9H7D0 1870 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 CKBP12277 381 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 ACTN1P12814 892 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 TCF7P36402 384 aaPredicted RBP25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 ZNF76P36508 570 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 SREBF1P36956 1147 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 STK3Q13188 491 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 LRRC8DQ7L1W4 858 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 ATP6V0A1Q93050 837 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 ZMYND12Q9H0C1 365 aa25.04■■□□□ 1.6
NDUFS3-210ENST00000533105 ESYT2A0FGR8 921 aa25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 CPLX1O14810 134 aa25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 ARHGAP4P98171 946 aa25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 CEP55Q53EZ4 464 aa25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 REXO1Q8N1G1 1221 aaKnown RBP25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 SEPT1Q8WYJ6 367 aa25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 WNT8BQ93098 351 aa25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 ZNF274Q96GC6 653 aaPredicted RBP25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 RNPEPQ9H4A4 650 aa25.03■■□□□ 1.6
NDUFS3-210ENST00000533105 SCN5AQ14524 2016 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 TMEM265A0A087WTH1 108 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 GSTTP1A0A1W2PQM5 241 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 ADAMTS3O15072 1205 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 ARP10275 920 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 GNA11P29992 359 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 RBL2Q08999 1139 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 TRIM22Q8IYM9 498 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 CDX2Q99626 313 aaPredicted RBP25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 JPH1Q9HDC5 661 aaPredicted RBP25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 SETD4Q9NVD3 440 aa25.02■■□□□ 1.6
NDUFS3-210ENST00000533105 VPS54Q9P1Q0 977 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms