RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 CENPPQ6IPU0 288 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.78■□□□□ 0.6
SREK1-212ENST00000522912 CSGALNACT2Q8N6G5 542 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 TC2NQ8N9U0 490 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 TRERF1Q96PN7 1200 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 BMP2KQ9NSY1 1161 aaPredicted RBP18.78■□□□□ 0.6
SREK1-212ENST00000522912 DNM3Q9UQ16 869 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 PAPPA2Q9BXP8 1791 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 ADM5C9JUS6 153 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 ITGB5P18084 799 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 DSG3P32926 999 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 RPS6P62753 249 aaKnown RBP18.78■□□□□ 0.6
SREK1-212ENST00000522912 GUF1Q8N442 669 aaKnown RBP18.78■□□□□ 0.6
SREK1-212ENST00000522912 ANKRD20A12PQ8NF67 263 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 NOC3LQ8WTT2 800 aaKnown RBP18.78■□□□□ 0.6
SREK1-212ENST00000522912 TAAR1Q96RJ0 339 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 ZNF577Q9BSK1 485 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 ADAMTS5Q9UNA0 930 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 RABGAP1Q9Y3P9 1069 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 R3HCC1Q9Y3T6 440 aaKnown RBP18.78■□□□□ 0.6
SREK1-212ENST00000522912 RIPK3Q9Y572 518 aa18.78■□□□□ 0.6
SREK1-212ENST00000522912 OTOFQ9HC10 1997 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 PTPRFP10586 1907 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 GAS7O60861 476 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 ADKP55263 362 aaKnown RBP18.77■□□□□ 0.6
SREK1-212ENST00000522912 SETQ01105 290 aaPredicted RBP18.77■□□□□ 0.6
SREK1-212ENST00000522912 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
SREK1-212ENST00000522912 PABPC4Q13310 644 aaKnown RBP eCLIP18.77■□□□□ 0.6
SREK1-212ENST00000522912 LRRC41Q15345 812 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 TMEM139Q8IV31 216 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 SYT2Q8N9I0 419 aaPredicted RBP18.77■□□□□ 0.6
SREK1-212ENST00000522912 DCPSQ96C86 337 aaKnown RBP18.77■□□□□ 0.6
SREK1-212ENST00000522912 EEF2KMTQ96G04 330 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 HSD17B14Q9BPX1 270 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 MAP3K20Q9NYL2 800 aaKnown RBP18.77■□□□□ 0.6
SREK1-212ENST00000522912 PNMA2Q9UL42 364 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 SNCAIPQ9Y6H5 919 aa18.77■□□□□ 0.6
SREK1-212ENST00000522912 FRMPD4Q14CM0 1322 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 CHMP2AO43633 222 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 EEF1GP26641 437 aaKnown RBP18.76■□□□□ 0.59
SREK1-212ENST00000522912 RAD51AP2Q09MP3 1159 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 CATSPERGQ6ZRH7 1159 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 SAMD3Q8N6K7 520 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 FGFBP2Q9BYJ0 223 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 KCND1Q9NSA2 647 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 PCDHA2Q9Y5H9 948 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 SLITRK3O94933 977 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 HOXA7P31268 230 aaPredicted RBP18.76■□□□□ 0.59
SREK1-212ENST00000522912 MAP3K9P80192 1104 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 MRPS9P82933 396 aaKnown RBP18.76■□□□□ 0.59
SREK1-212ENST00000522912 VGLL4Q14135 290 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 CTTNQ14247 550 aaKnown RBP18.76■□□□□ 0.59
SREK1-212ENST00000522912 COG2Q14746 738 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 FAM26FQ5R3K3 315 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 CEP135Q66GS9 1140 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 E4F1Q66K89 784 aaPredicted RBP18.76■□□□□ 0.59
SREK1-212ENST00000522912 B3GNT9Q6UX72 402 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 CCDC65Q8IXS2 484 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 CCAR2Q8N163 923 aaKnown RBP18.76■□□□□ 0.59
SREK1-212ENST00000522912 CCDC112Q8NEF3 446 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 DYDC2Q96IM9 177 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 UNC45AQ9H3U1 944 aa18.76■□□□□ 0.59
SREK1-212ENST00000522912 FRMD3A2A2Y4 597 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 IPO5O00410 1097 aaKnown RBP18.75■□□□□ 0.59
SREK1-212ENST00000522912 BCRP11274 1271 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 RBL2Q08999 1139 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 GIT2Q14161 759 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 PCNX4Q63HM2 1172 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 SULF1Q8IWU6 871 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 PURBQ96QR8 312 aaKnown RBP18.75■□□□□ 0.59
SREK1-212ENST00000522912 WDR11Q9BZH6 1224 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 TUFT1Q9NNX1 390 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 RNF146Q9NTX7 359 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.75■□□□□ 0.59
SREK1-212ENST00000522912 UBIAD1Q9Y5Z9 338 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 ITIH6Q6UXX5 1313 aa18.75■□□□□ 0.59
SREK1-212ENST00000522912 KCNJ6P48051 423 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 TKFCQ3LXA3 575 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 SH3D19Q5HYK7 790 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 RNF207Q6ZRF8 634 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 NIPA1Q7RTP0 329 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 KRT26Q7Z3Y9 468 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 KCNH7Q9NS40 1196 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 TRMT1Q9NXH9 659 aaKnown RBP18.74■□□□□ 0.59
SREK1-212ENST00000522912 TBC1D7Q9P0N9 293 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 MAGEC2Q9UBF1 373 aaPredicted RBP18.74■□□□□ 0.59
SREK1-212ENST00000522912 ZNF214Q9UL59 606 aaPredicted RBP18.74■□□□□ 0.59
SREK1-212ENST00000522912 NRDCO43847 1150 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 EYA4O95677 639 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 KRT18P05783 430 aaKnown RBP18.74■□□□□ 0.59
SREK1-212ENST00000522912 EIF2AK2P19525 551 aaKnown RBP18.74■□□□□ 0.59
SREK1-212ENST00000522912 TMEM132BQ14DG7 1078 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 SNRNP48Q6IEG0 339 aaKnown RBP18.74■□□□□ 0.59
SREK1-212ENST00000522912 NSMFQ6X4W1 530 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 CNKSR2Q8WXI2 1034 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 CNOT6LQ96LI5 555 aaKnown RBP18.74■□□□□ 0.59
SREK1-212ENST00000522912 C16orf45Q96MC5 204 aaPredicted RBP18.74■□□□□ 0.59
SREK1-212ENST00000522912 RIT2Q99578 217 aa18.74■□□□□ 0.59
SREK1-212ENST00000522912 TEKT3Q9BXF9 490 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms