RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CPSF1Q10570 1443 aaKnown RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 ZBTB5O15062 677 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 BUB1O43683 1085 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 ARL4AP40617 200 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 ARHGAP25P42331 645 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 EN1Q05925 392 aaPredicted RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 NR5A1Q13285 461 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 SMAP1Q8IYB5 467 aaPredicted RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 C17orf53Q8N3J3 647 aaPredicted RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 MCPH1Q8NEM0 835 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 TSC1Q92574 1164 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 LDHAP00338 332 aaKnown RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 ZNF131P52739 623 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 ZNF658Q5TYW1 1059 aaPredicted RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 DSTYKQ6XUX3 929 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 RNF139Q8WU17 664 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 STAG1Q8WVM7 1258 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 MRPL47Q9HD33 250 aaKnown RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 FAM83BQ5T0W9 1011 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 ZBTB33Q86T24 672 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 TOPORSQ9NS56 1045 aaPredicted RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 UTYO14607 1347 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 ATF2P15336 505 aa17.64■□□□□ 0.42
PCDHA3-201ENST00000522353 INPP5BP32019 993 aa17.64■□□□□ 0.42
PCDHA3-201ENST00000522353 GARSP41250 739 aaKnown RBP17.64■□□□□ 0.42
PCDHA3-201ENST00000522353 SNRNP48Q6IEG0 339 aaKnown RBP17.64■□□□□ 0.42
PCDHA3-201ENST00000522353 RYBPQ8N488 228 aaPredicted RBP17.64■□□□□ 0.42
PCDHA3-201ENST00000522353 PCIF1Q9H4Z3 704 aa17.64■□□□□ 0.42
PCDHA3-201ENST00000522353 TBC1D22BQ9NU19 505 aa17.64■□□□□ 0.42
PCDHA3-201ENST00000522353 FAM170AA1A519 330 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 RAB3IPQ96QF0 476 aaPredicted RBP17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 VCX3BQ9H321 246 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 LRRC41Q15345 812 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 C10orf67Q8IYJ2 551 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 HOMER3Q9NSC5 361 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 PASKQ96RG2 1323 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 RNF40O75150 1001 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 MARK3P27448 753 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 MTMR1Q13613 665 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 SKA2Q8WVK7 121 aaPredicted RBP17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 ZNF653Q96CK0 615 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 TTC1Q99614 292 aa17.64■□□□□ 0.41
PCDHA3-201ENST00000522353 IGKV5-2P06315 115 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 SPP2Q13103 211 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 RCSD1Q6JBY9 416 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 PPP2R2CQ9Y2T4 447 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 MROH7-TTC4A0A0A0MT08 1334 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 CLIC2O15247 247 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 MESDQ14696 234 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 KAZNQ674X7 775 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 RFX6Q8HWS3 928 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 EFCAB13Q8IY85 973 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 MSTO1Q9BUK6 570 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 SUGT1Q9Y2Z0 365 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 TROVE2P10155 538 aaKnown RBP eCLIP17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 STX2P32856 288 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 OSTNP61366 133 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 WDR64B1ANS9 1081 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 ABCB11O95342 1321 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 MAPK4P31152 587 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 CTNNA1P35221 906 aaKnown RBP17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 KRT76Q01546 638 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 TTLL4Q14679 1199 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 NFIXQ14938 502 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 FASTKD5Q7L8L6 764 aaKnown RBP17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 EEF2KMTQ96G04 330 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 RASSF4Q9H2L5 321 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 RNF146Q9NTX7 359 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 BCAP29Q9UHQ4 241 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 MAD1L1Q9Y6D9 718 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 PLA2R1Q13018 1463 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 GABPB1Q06547 395 aaPredicted RBP17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 MFSD14CQ5VZR4 134 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 DNAJC24Q6P3W2 148 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 RILPQ96NA2 401 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 FTOQ9C0B1 505 aaKnown RBP eCLIP17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 KIF9Q9HAQ2 790 aa17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
PCDHA3-201ENST00000522353 GSTA1P08263 222 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 GSTA2P09210 222 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 NFKBIAP25963 317 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 ETF1P62495 437 aaKnown RBP17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 TMTC3Q6ZXV5 915 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 LINC00301Q8NCQ3 95 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 HERC5Q9UII4 1024 aaKnown RBP17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 VPS72Q15906 364 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 RPUSD2Q8IZ73 545 aaKnown RBP17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 DESI2Q9BSY9 194 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 MTA3Q9BTC8 594 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 BHMT2Q9H2M3 363 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 GOLGA8SH3BPF8 625 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 CCNE1P24864 410 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 ARHGEF2Q92974 986 aaKnown RBP17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 GRIN3BO60391 1043 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 GPSM2P81274 684 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 PPP1R18Q6NYC8 613 aa17.62■□□□□ 0.41
PCDHA3-201ENST00000522353 PRPF38AQ8NAV1 312 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms