RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 DHX37Q8IY37 1157 aaKnown RBP8.88□□□□□ -0.99
RFC1-213ENST00000512275 TOP6BLQ8N6T0 577 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 CLUHP3Q96NS8 147 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 DUSP23Q9BVJ7 150 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 PRDM14Q9GZV8 571 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 TSPYL4Q9UJ04 414 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 RCAN3Q9UKA8 241 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 AKT3Q9Y243 479 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 UBR2Q8IWV8 1755 aa8.88□□□□□ -0.99
RFC1-213ENST00000512275 LAMB4A4D0S4 1761 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 FAM95CA0A1B0GW59 222 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 NOP56O00567 594 aaKnown RBP8.87□□□□□ -0.99
RFC1-213ENST00000512275 PRODHO43272 600 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 KCNQ2O43526 872 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 C6orf222P0C671 652 aaPredicted RBP8.87□□□□□ -0.99
RFC1-213ENST00000512275 TRIM61Q5EBN2 209 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 ARTNQ5T4W7 220 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 NSMFQ6X4W1 530 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 FAM214BQ7L5A3 538 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 CRACR2BQ8N4Y2 399 aaPredicted RBP8.87□□□□□ -0.99
RFC1-213ENST00000512275 COX4I2Q96KJ9 171 aa8.87□□□□□ -0.99
RFC1-213ENST00000512275 THRAP3Q9Y2W1 955 aaKnown RBP8.87□□□□□ -0.99
RFC1-213ENST00000512275 ELL2O00472 640 aaPredicted RBP8.86□□□□□ -0.99
RFC1-213ENST00000512275 CHL1O00533 1208 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 IRS4O14654 1257 aaPredicted RBP8.86□□□□□ -0.99
RFC1-213ENST00000512275 LRRN2O75325 713 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 LEFTY1O75610 366 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 HSP90AB1P08238 724 aaKnown RBP8.86□□□□□ -0.99
RFC1-213ENST00000512275 POU3F3P20264 500 aaPredicted RBP8.86□□□□□ -0.99
RFC1-213ENST00000512275 STAT3P40763 770 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 IRX6P78412 446 aaPredicted RBP8.86□□□□□ -0.99
RFC1-213ENST00000512275 GRB10Q13322 594 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 TAF7Q15545 349 aaPredicted RBP8.86□□□□□ -0.99
RFC1-213ENST00000512275 DDB1Q16531 1140 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 KRT24Q2M2I5 525 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 BTN2A2Q8WVV5 523 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 IER2Q9BTL4 223 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 ZFP64Q9NPA5 681 aa8.86□□□□□ -0.99
RFC1-213ENST00000512275 DIS3Q9Y2L1 958 aaKnown RBP8.86□□□□□ -0.99
RFC1-213ENST00000512275 SBF2Q86WG5 1849 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 EXOC5O00471 708 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 KCNQ3O43525 872 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 DLX3O60479 287 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 CYP7A1P22680 504 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 GTF2IRD2BQ6EKJ0 949 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 C22orf34Q6ZV56 151 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 GTF2IRD2Q86UP8 949 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 FIBCD1Q8N539 461 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 TSPYL6Q8N831 410 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 C8orf58Q8NAV2 365 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 GATA6Q92908 595 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 BRF1Q92994 677 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 Q96M66 194 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 IPO9Q96P70 1041 aaKnown RBP8.85□□□□□ -0.99
RFC1-213ENST00000512275 FBXL21Q9UKT6 434 aa8.85□□□□□ -0.99
RFC1-213ENST00000512275 TRPC5Q9UL62 973 aaPredicted RBP8.85□□□□□ -0.99
RFC1-213ENST00000512275 BTBD11A6QL63 1104 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 GSG1L2A8MUP6 293 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 KCNH1O95259 989 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 SCG5P05408 212 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 MYCLP1P12525 358 aaPredicted RBP8.84□□□□□ -0.99
RFC1-213ENST00000512275 RXRBP28702 533 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 GFRA1P56159 465 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 MAP4K2Q12851 820 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 NOL9Q5SY16 702 aaKnown RBP8.84□□□□□ -0.99
RFC1-213ENST00000512275 PAOXQ6QHF9 649 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 DTWD2Q8NBA8 298 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 STAG1Q8WVM7 1258 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 NKX2-4Q9H2Z4 354 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 NOL6Q9H6R4 1146 aaKnown RBP8.84□□□□□ -0.99
RFC1-213ENST00000512275 SLC52A2Q9HAB3 445 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 TRIM39Q9HCM9 518 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 INTS7Q9NVH2 962 aaKnown RBP8.84□□□□□ -0.99
RFC1-213ENST00000512275 GFOD1Q9NXC2 390 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 TPX2Q9ULW0 747 aaKnown RBP8.84□□□□□ -0.99
RFC1-213ENST00000512275 CACNA1FO60840 1977 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 NHSQ6T4R5 1651 aa8.84□□□□□ -0.99
RFC1-213ENST00000512275 BTAF1O14981 1849 aa8.83□□□□□ -1
RFC1-213ENST00000512275 TCERG1O14776 1098 aaKnown RBP8.83□□□□□ -1
RFC1-213ENST00000512275 SIGLEC6O43699 453 aa8.83□□□□□ -1
RFC1-213ENST00000512275 PDE8AO60658 829 aa8.83□□□□□ -1
RFC1-213ENST00000512275 BCAR3O75815 825 aa8.83□□□□□ -1
RFC1-213ENST00000512275 RRP1P56182 461 aaKnown RBP8.83□□□□□ -1
RFC1-213ENST00000512275 CYP4F3Q08477 520 aa8.83□□□□□ -1
RFC1-213ENST00000512275 SLC39A6Q13433 755 aa8.83□□□□□ -1
RFC1-213ENST00000512275 SF1Q15637 639 aaKnown RBP8.83□□□□□ -1
RFC1-213ENST00000512275 TWISTNBQ3B726 338 aaPredicted RBP8.83□□□□□ -1
RFC1-213ENST00000512275 TMC3Q7Z5M5 1100 aa8.83□□□□□ -1
RFC1-213ENST00000512275 RNF180Q86T96 592 aa8.83□□□□□ -1
RFC1-213ENST00000512275 MARCH10Q8NA82 808 aaPredicted RBP8.83□□□□□ -1
RFC1-213ENST00000512275 GSTCDQ8NEC7 633 aa8.83□□□□□ -1
RFC1-213ENST00000512275 C1orf159Q96HA4 380 aa8.83□□□□□ -1
RFC1-213ENST00000512275 PRDM5Q9NQX1 630 aaPredicted RBP8.83□□□□□ -1
RFC1-213ENST00000512275 KCPQ6ZWJ8 1503 aa8.82□□□□□ -1
RFC1-213ENST00000512275 PLIN1O60240 522 aa8.82□□□□□ -1
RFC1-213ENST00000512275 VAMP4O75379 141 aa8.82□□□□□ -1
RFC1-213ENST00000512275 FAM87AP0C7U9 286 aa8.82□□□□□ -1
RFC1-213ENST00000512275 SDSP20132 328 aa8.82□□□□□ -1
RFC1-213ENST00000512275 KIR3DL1P43629 444 aa8.82□□□□□ -1
RFC1-213ENST00000512275 RARSP54136 660 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms