RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MAGEB10Q96LZ2 347 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 SMOC1Q9H4F8 434 aa6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 PCDHB4Q9Y5E5 795 aa6.03□□□□□ -1.44
HMGB3P13-201ENST00000511263 B4E1Z4 1266 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 PPP1R11O60927 126 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 NPTXRO95502 500 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 SOD2P04179 222 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 LCP1P13796 627 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 PI3P19957 117 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 GUCY1A3Q02108 690 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 CNGB1Q14028 1251 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 NFIXQ14938 502 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 EMC4Q5J8M3 183 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 CNKSR3Q6P9H4 555 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 NOP9Q86U38 636 aaKnown RBP6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 SLC6A20Q9NP91 592 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 SFMBT1Q9UHJ3 866 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 NAP1L2Q9ULW6 460 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 PCDHA5Q9Y5H7 936 aa6.02□□□□□ -1.45
HMGB3P13-201ENST00000511263 CYP7B1O75881 506 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 CYP2C8P10632 490 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 SYN1P17600 705 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 NKX3-2P78367 333 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 CAP1Q01518 475 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 CACNB2Q08289 660 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 NTRK3Q16288 839 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 KCNT2Q6UVM3 1135 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 NLRP10Q86W26 655 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 NLGN4XQ8N0W4 816 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 KISS1RQ969F8 398 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 FBXW5Q969U6 566 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 EXOC2Q96KP1 924 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 WRNIP1Q96S55 665 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 POLR3GLQ9BT43 218 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 XYLT2Q9H1B5 865 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 RTEL1Q9NZ71 1219 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 MYOTQ9UBF9 498 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 NDOR1Q9UHB4 597 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 PALD1Q9ULE6 856 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 PTCH2Q9Y6C5 1203 aa6.01□□□□□ -1.45
HMGB3P13-201ENST00000511263 SOGA1O94964 1423 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 IRS4O14654 1257 aaPredicted RBP6□□□□□ -1.45
HMGB3P13-201ENST00000511263 PLD2O14939 933 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 SGSM2O43147 1006 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 ASGR2P07307 311 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 PMLP29590 882 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 EPHB3P54753 998 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 CRY1Q16526 586 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 SKOR2Q2VWA4 1001 aaPredicted RBP6□□□□□ -1.45
HMGB3P13-201ENST00000511263 FNDC3BQ53EP0 1204 aaKnown RBP6□□□□□ -1.45
HMGB3P13-201ENST00000511263 OTOP3Q7RTS5 596 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 B3GNT8Q7Z7M8 397 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 HOMER1Q86YM7 354 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 MIB1Q86YT6 1006 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 ZC3H7AQ8IWR0 971 aaKnown RBP6□□□□□ -1.45
HMGB3P13-201ENST00000511263 FAM126BQ8IXS8 530 aa6□□□□□ -1.45
HMGB3P13-201ENST00000511263 CEP164Q9UPV0 1460 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 OTOL1A6NHN0 477 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 SMARCA5O60264 1052 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 CLSTN1O94985 981 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 CANXP27824 592 aaKnown RBP5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 FLT3P36888 993 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 FOXO4P98177 505 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 TCEA2Q15560 299 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 TRIM61Q5EBN2 209 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 IGDCC3Q8IVU1 814 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 SH3TC2Q8TF17 1288 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 APPBP2Q92624 585 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 ANP32BQ92688 251 aaKnown RBP5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 TOE1Q96GM8 510 aaKnown RBP5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 RXFP1Q9HBX9 757 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 EPB41L4AQ9HCS5 686 aaPredicted RBP5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 CATSPERZQ9NTU4 200 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 PMF1-BGLAPU3KQ54 211 aa5.99□□□□□ -1.45
HMGB3P13-201ENST00000511263 BLACEA4D250 179 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 ARNTLO00327 626 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 WNT9AO14904 365 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 MSCO60682 206 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 TADA3O75528 432 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 AFF3P51826 1226 aaKnown RBP5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 VMACQ2NL98 169 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 FOXB2Q5VYV0 432 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 CD300LDQ6UXZ3 194 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 TTLL7Q6ZT98 887 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 C16orf59Q7L2K0 433 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 FAM129CQ86XR2 697 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 LILRB2Q8N423 598 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 TTLL6Q8N841 843 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 TTLL11Q8NHH1 800 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 FEZF2Q8TBJ5 459 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 DACT3Q96B18 629 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 PWWP2AQ96N64 755 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 KCNJ15Q99712 375 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 JAM3Q9BX67 310 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 NCOA5Q9HCD5 579 aaKnown RBP5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 DTLQ9NZJ0 730 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 FBLN5Q9UBX5 448 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 DSEQ9UL01 958 aa5.98□□□□□ -1.45
HMGB3P13-201ENST00000511263 SIT1Q9Y3P8 196 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms