RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 ADAM9Q13443 819 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 BIRC2Q13490 618 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 NFE2L2Q16236 605 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 MROH9Q5TGP6 573 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 EGFLAMQ63HQ2 1017 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 SPRED1Q7Z699 444 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 NLRP10Q86W26 655 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 SLC43A3Q8NBI5 491 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 SH3RF3Q8TEJ3 882 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 BTN2A2Q8WVV5 523 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 TRMT2BQ96GJ1 504 aaKnown RBP4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 SLKQ9H2G2 1235 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 NKX2-4Q9H2Z4 354 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 CHPF2Q9P2E5 772 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 KLHL42Q9P2K6 505 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 TMEFF2Q9UIK5 374 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 COMMD10Q9Y6G5 202 aa4.62□□□□□ -1.67
HMGB3P15-201ENST00000507326 PLIN1O60240 522 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 B4GALT3O60512 393 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 S100BP04271 92 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 ZNF28P17035 718 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 ECI1P42126 302 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 ZNF143P52747 638 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 ICAM4Q14773 271 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 CCDC144BQ3MJ40 725 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 IQCEQ6IPM2 695 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 VPS37DQ86XT2 251 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 NT5DC4Q86YG4 428 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 RIOX2Q8IUF8 465 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 CCDC103Q8IW40 242 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 CCDC146Q8IYE0 955 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 DIO2Q92813 273 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 KISS1RQ969F8 398 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 ANAPC16Q96DE5 110 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 YTHDC1Q96MU7 727 aaKnown RBP4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 SCAND2PQ9GZW5 306 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 ZSWIM4Q9H7M6 989 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 NGRNQ9NPE2 291 aaKnown RBP4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 PPP4R1LQ9P1A2 415 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 FBXL7Q9UJT9 491 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 X6R8D5 127 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 CLSPNQ9HAW4 1339 aa4.61□□□□□ -1.67
HMGB3P15-201ENST00000507326 C9orf118A6NHY6 69 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 ARNTLO00327 626 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 U2SURPO15042 1029 aaKnown RBP4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 MEFVO15553 781 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 SUV39H1O43463 412 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 MYO1BO43795 1136 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 SNRPB2P08579 225 aaKnown RBP4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 C6P13671 934 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 IL13P35225 146 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 HDLBPQ00341 1268 aaKnown RBP4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 KCNAB2Q13303 367 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 SAFB2Q14151 953 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 NCAPHQ15003 741 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 CDSNQ15517 529 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 E4F1Q66K89 784 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 KRBA2Q6ZNG9 492 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 TSHZ1Q6ZSZ6 1077 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 PLEKHH3Q7Z736 793 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 Q8N1Y9 231 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 ARRDC4Q8NCT1 418 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 TMEM169Q96HH4 297 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 CEP89Q96ST8 783 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 L2HGDHQ9H9P8 463 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 CROTQ9UKG9 612 aa4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 COA3Q9Y2R0 106 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P15-201ENST00000507326 NPEPPSL1A6NEC2 478 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 TBX1O43435 398 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 WDHD1O75717 1129 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 MAP4K4O95819 1239 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 TACR2P21452 398 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 GTF2A2P52657 109 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 MLLT6P55198 1093 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 SURF1Q15526 300 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 ZRSR2Q15696 482 aaKnown RBP4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 RCBTB1Q8NDN9 531 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 PMFBP1Q8TBY8 1022 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 MBD6Q96DN6 1003 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 TOE1Q96GM8 510 aaKnown RBP4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 MRFAP1L1Q96HT8 127 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 SEC16BQ96JE7 1060 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 CHAMP1Q96JM3 812 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 TMEM168Q9H0V1 697 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 CAPN10Q9HC96 672 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 SLC52A1Q9NWF4 448 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 DTLQ9NZJ0 730 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 LRP2BPQ9P2M1 347 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 ZNF652Q9Y2D9 606 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 TSC22D4Q9Y3Q8 395 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 PCDHB4Q9Y5E5 795 aa4.59□□□□□ -1.67
HMGB3P15-201ENST00000507326 TCRBV5S2A0A599 114 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 HGSO14964 777 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 GPR42O15529 346 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 PRC1O43663 620 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 PARNO95453 639 aaKnown RBP4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 ITGAVP06756 1048 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 HOXC12P31275 282 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 KCNJ6P48051 423 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 HDAC1Q13547 482 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms