RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MROH7-TTC4A0A0A0MT08 1334 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 LRRC41Q15345 812 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 NUGGCQ68CJ6 796 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 KRT27Q7Z3Y8 459 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 PIH1D3Q9NQM4 214 aaKnown RBP18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 MAP3K21Q5TCX8 1036 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 ARHGAP27Q6ZUM4 889 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 TUBB6Q9BUF5 446 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 GYPCP04921 128 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 TRIM65Q6PJ69 517 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 CFAP61Q8NHU2 1237 aa18.71■□□□□ 0.59
HMGXB3-201ENST00000502717 NEURL4Q96JN8 1562 aa18.71■□□□□ 0.58
HMGXB3-201ENST00000502717 VPS41P49754 854 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 MAP7D1Q3KQU3 841 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 SPDL1Q96EA4 605 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 MAK16Q9BXY0 300 aaKnown RBP18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 HSPA1LP34931 641 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 IRX1P78414 480 aaPredicted RBP18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 RNF168Q8IYW5 571 aaPredicted RBP18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 NEDD4P46934 1319 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 ZNF185O15231 689 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 NCK2O43639 380 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 CAPRIN2Q6IMN6 1127 aaKnown RBP18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 MMGT1Q8N4V1 131 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 SH2D3CQ8N5H7 860 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 RILPQ96NA2 401 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 TMOD4Q9NZQ9 345 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 DDX25Q9UHL0 483 aaKnown RBP18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 NRKQ7Z2Y5 1582 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 ATP5HO75947 161 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 ECEL1O95672 775 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 BAG2O95816 211 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 CA8P35219 290 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 SMTNP53814 917 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 ALX1Q15699 326 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 FNBP1Q96RU3 617 aa18.7■□□□□ 0.58
HMGXB3-201ENST00000502717 ADGRB1O14514 1584 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 SLFN12Q8IYM2 578 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 LRRN4CLQ8ND94 238 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 USTQ9Y2C2 406 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 PTPN22Q9Y2R2 807 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 CHMP2AO43633 222 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 CPDO75976 1380 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 LRIG3Q6UXM1 1119 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 EDEM3Q9BZQ6 932 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 BCAP29Q9UHQ4 241 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 RAB21Q9UL25 225 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 RPS8P62241 208 aaKnown RBP18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 MCAMP43121 646 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 POLE2P56282 527 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 GFPT1Q06210 699 aaPredicted RBP18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 SH3GLB2Q9NR46 395 aa18.69■□□□□ 0.58
HMGXB3-201ENST00000502717 PODXLO00592 558 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 LMNAP02545 664 aaKnown RBP18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 FGGP02679 453 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 TMTC3Q6ZXV5 915 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 CNKSR1Q969H4 720 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 AXIN2Q9Y2T1 843 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 SASH3O75995 380 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 PPM1FP49593 454 aaPredicted RBP18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 MESDQ14696 234 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 NCAPHQ15003 741 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 APBB1IPQ7Z5R6 666 aaPredicted RBP18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 LOC102724428A0A0B4J2F2 783 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 LRRIQ3A6PVS8 624 aaPredicted RBP18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 CYP27B1O15528 508 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 CYP2J2P51589 502 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 SIK1P57059 783 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 DPYDQ12882 1025 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 SCYL3Q8IZE3 742 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 MAPK13O15264 365 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 KCNB1Q14721 858 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 LRRC23Q53EV4 343 aaPredicted RBP18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 PROM2Q8N271 834 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 TGFBRAP1Q8WUH2 860 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 SH3GL3Q99963 347 aa18.68■□□□□ 0.58
HMGXB3-201ENST00000502717 CASQ2O14958 399 aaPredicted RBP18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 PLEKHA8P1O95397 391 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 FAM107AO95990 144 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 PLCB4Q15147 1175 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 BRINP3Q76B58 766 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 MAPKAPK5Q8IW41 473 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 Q9H521 79 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 ANKZF1Q9H8Y5 726 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 ARHGAP42A6NI28 874 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 GOLGA8HP0CJ92 632 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 ITIH3Q06033 890 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 UNC13DQ70J99 1090 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 PALM2Q8IXS6 379 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 YIPF3Q9GZM5 350 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 SLITRK6Q9H5Y7 841 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 KIAA1024Q9UPX6 916 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 PTPRUQ92729 1446 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 GCFC2P16383 781 aaKnown RBP18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 GYG1P46976 350 aa18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 ATP2C1P98194 919 aaPredicted RBP18.67■□□□□ 0.58
HMGXB3-201ENST00000502717 RDH13Q8NBN7 331 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms